RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CD180Q99467 661 aa16.75■□□□□ 0.27
C9orf43-202ENST00000374165 PITHD1Q9GZP4 211 aaPredicted RBP16.75■□□□□ 0.27
C9orf43-202ENST00000374165 KLHL31Q9H511 634 aa16.75■□□□□ 0.27
C9orf43-202ENST00000374165 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
C9orf43-202ENST00000374165 STARD5Q9NSY2 213 aa16.75■□□□□ 0.27
C9orf43-202ENST00000374165 MRGBPQ9NV56 204 aa16.75■□□□□ 0.27
C9orf43-202ENST00000374165 SEMA5BQ9P283 1151 aa16.75■□□□□ 0.27
C9orf43-202ENST00000374165 PDP2Q9P2J9 529 aa16.75■□□□□ 0.27
C9orf43-202ENST00000374165 H0YGG7 62 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 NDUFS4O43181 175 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 ZBTB11O95625 1053 aaPredicted RBP16.74■□□□□ 0.27
C9orf43-202ENST00000374165 ITGAXP20702 1163 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 GABRA4P48169 554 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 CLDN6P56747 220 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 ARF3P61204 181 aaPredicted RBP16.74■□□□□ 0.27
C9orf43-202ENST00000374165 HERC3Q15034 1050 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 SNCBQ16143 134 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 HKDC1Q2TB90 917 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 AP5B1Q2VPB7 878 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 ARHGAP24Q8N264 748 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 DNAJC22Q8N4W6 341 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 OR4D9Q8NGE8 314 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 SLC13A3Q8WWT9 602 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 TCTN2Q96GX1 697 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 GFM1Q96RP9 751 aaKnown RBP16.74■□□□□ 0.27
C9orf43-202ENST00000374165 MS4A8Q9BY19 250 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 BRF2Q9HAW0 419 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 SOHLH2Q9NX45 425 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 ANKMY1Q9P2S6 941 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 VPS29Q9UBQ0 182 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 SERTM1A2A2V5 107 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 C4orf51C9J302 202 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 PSMD12O00232 456 aaPredicted RBP16.74■□□□□ 0.27
C9orf43-202ENST00000374165 EIF2S1P05198 315 aaKnown RBP16.74■□□□□ 0.27
C9orf43-202ENST00000374165 AHRP35869 848 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 PDX1P52945 283 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 IMPG1Q17R60 797 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 ARHGAP22Q7Z5H3 698 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 KIAA2013Q8IYS2 634 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 ULK2Q8IYT8 1036 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 TM4SF19Q96DZ7 209 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 SLC45A3Q96JT2 553 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 CCT7Q99832 543 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 C1orf50Q9BV19 199 aa16.74■□□□□ 0.27
C9orf43-202ENST00000374165 SORBS1Q9BX66 1292 aaKnown RBP16.74■□□□□ 0.27
C9orf43-202ENST00000374165 LRIT2A6NDA9 550 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 D6RAR5 112 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 SLC28A1O00337 649 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 AIM2O14862 343 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 RGS14O43566 566 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 B3GALT4O96024 378 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 RAP1GDS1P52306 607 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 DIO3P55073 304 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 HSD11B2P80365 405 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 RELAQ04206 551 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 TBL3Q12788 808 aaKnown RBP16.73■□□□□ 0.27
C9orf43-202ENST00000374165 CSTF3Q12996 717 aaKnown RBP16.73■□□□□ 0.27
C9orf43-202ENST00000374165 GK5Q6ZS86 529 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 PRSS42Q7Z5A4 293 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 MCATQ8IVS2 390 aaKnown RBP16.73■□□□□ 0.27
C9orf43-202ENST00000374165 SLITRK4Q8IW52 837 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 SCUBE1Q8IWY4 988 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 DEFB124Q8NES8 71 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 KLHL6Q8WZ60 621 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
C9orf43-202ENST00000374165 SLC41A2Q96JW4 573 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 CCDC74BQ96LY2 380 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 CCDC167Q9P0B6 97 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 SCN2AQ99250 2005 aa16.73■□□□□ 0.27
C9orf43-202ENST00000374165 A0A088AWK7 358 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 A0A0G2JN53 185 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 RTCAO00442 366 aaKnown RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 VPS4BO75351 444 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 ENTPD5O75356 428 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 SEC22BO75396 215 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 CLEC3AO75596 197 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 GBAP04062 536 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 FOLR1P15328 257 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 LBPP18428 481 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 NUDT2P50583 147 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 VSX2P58304 361 aaPredicted RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 TRIP6Q15654 476 aaKnown RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 ATP6AP1LQ52LC2 224 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 DEPDC1Q5TB30 811 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 UBE3DQ7Z6J8 389 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 DEFB107AQ8IZN7 70 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 OR9I1Q8NGQ6 314 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 WDR60Q8WVS4 1066 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 RCN3Q96D15 328 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 ZNF768Q9H5H4 540 aaKnown RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 PDE7BQ9NP56 450 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 SLC7A8Q9UHI5 535 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 ASPMQ8IZT6 3477 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 CELSR3Q9NYQ7 3312 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 FOXD2O60548 495 aaPredicted RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 NELFEP18615 380 aaKnown RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 PTX3P26022 381 aaPredicted RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 MLLT3P42568 568 aaPredicted RBP16.72■□□□□ 0.27
C9orf43-202ENST00000374165 ATP4BP51164 291 aa16.72■□□□□ 0.27
C9orf43-202ENST00000374165 RPL38P63173 70 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms