RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 PUM1Q14671 1186 aaKnown RBP eCLIP9.51□□□□□ -0.898e-9■■□□□ 14.1
SCAF11-202ENST00000369367 METTL2BQ6P1Q9 378 aaKnown RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 ARL9Q6T311 187 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 B3GNT9Q6UX72 402 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 CYS1Q717R9 158 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 OR5K1Q8NHB7 308 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 PELI2Q9HAT8 420 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 BCAT2O15382 392 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 GALK1P51570 392 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 VBP1P61758 197 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 FIGLAQ6QHK4 219 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 SUSD1Q6UWL2 747 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF304Q9HCX3 659 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 KLHL42Q9P2K6 505 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 TESMINQ9Y4I5 508 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 A0A1B0GTW7 788 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 ENGP17813 658 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 EIF2DP41214 584 aaKnown RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 KLHL17Q6TDP4 642 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 NAPRTQ6XQN6 538 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 USP53Q70EK8 1073 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 LRRC25Q8N386 305 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 FCGR1BQ92637 280 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 CD180Q99467 661 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 CGREF1Q99674 301 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 KCNK13Q9HB14 408 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 SPATA2Q9UM82 520 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 KLF11O14901 512 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 EMC8O43402 210 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 GLI3P10071 1580 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 PGCP20142 388 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 RPS3P23396 243 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 GDI2P50395 445 aaKnown RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 ARHGAP19Q14CB8 494 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 MARCH8Q5T0T0 291 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 TMPPEQ6ZT21 453 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 ARL14Q8N4G2 192 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 SHKBP1Q8TBC3 707 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 C15orf40Q8WUR7 153 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 EZH1Q92800 747 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 RRP8O43159 456 aaKnown RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CDKN1CP49918 316 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 RBBP4Q09028 425 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 FADDQ13158 208 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ALDH16A1Q8IZ83 802 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 LRRN4CLQ8ND94 238 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 GSTCDQ8NEC7 633 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 OR6K6Q8NGW6 343 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SORCS1Q8WY21 1168 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 HSPA12BQ96MM6 686 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 COQ7Q99807 217 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SLC46A2Q9BY10 475 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ZBP1Q9H171 429 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 REEP3Q6NUK4 255 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 RPL13AP3Q6NVV1 102 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 GPALPP1Q8IXQ4 340 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SLC5A8Q8N695 610 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CLEC1AQ8NC01 280 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 OR52J3Q8NH60 311 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 TLCD1Q96CP7 247 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PIWIL1Q96J94 861 aaKnown RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SIGLEC10Q96LC7 697 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF570Q96NI8 536 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CSNK1G1Q9HCP0 422 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 TMEM138Q9NPI0 162 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 UPB1Q9UBR1 384 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 C15orf41Q9Y2V0 281 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 NPIPA2E9PIF3 369 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 NPIPA3F8WFD2 350 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PROM1O43490 865 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ARHGEF15O94989 841 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SIX3O95343 332 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CYP4B1P13584 511 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ARSAP15289 507 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ELF3P78545 371 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 UBAP2Q5T6F2 1119 aaKnown RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 GPR149Q86SP6 731 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 LRRTM3Q86VH5 581 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SYNPOQ8N3V7 929 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 DEFB123Q8N688 67 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PROKR2Q8NFJ6 384 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ZFYVE21Q9BQ24 234 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 AKTIPQ9H8T0 292 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 TCF7L1Q9HCS4 588 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 RSL24D1Q9UHA3 163 aaKnown RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 KCTD3Q9Y597 815 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ANXA2P2A6NMY6 339 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 DLX3O60479 287 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ANXA2P07355 339 aaKnown RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PRKAR1AP10644 381 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SLC6A6P31641 620 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SDC2P34741 201 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 GRIA1P42261 906 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 VLDLRP98155 873 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PDK3Q15120 406 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 FLYWCH1Q4VC44 716 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 NXPE4Q6UWF7 544 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 IQCHQ86VS3 1027 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms