RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ALDH16A1Q8IZ83 802 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 BANPQ8N9N5 519 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 MINDY2Q8NBR6 621 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 GNPDA2Q8TDQ7 276 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 NECAB3Q96P71 396 aaPredicted RBP15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 ANKRD66B4E2M5 251 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 SLC15A1P46059 708 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 VSX2P58304 361 aaPredicted RBP15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 EVX2Q03828 476 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 MS4A13Q5J8X5 152 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 AGTRAPQ6RW13 159 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 VASH1Q7L8A9 365 aaPredicted RBP15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 OR8H3Q8N146 312 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 FANK1Q8TC84 345 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 COQ10BQ9H8M1 238 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 VAMP1P23763 118 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 GALK2Q01415 458 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 MPP2Q14168 576 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 RBM20Q5T481 1227 aaKnown RBP15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 SLC36A4Q6YBV0 504 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 SH3YL1Q96HL8 342 aaPredicted RBP15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 J3KR12 359 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 M0R2N6 131 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 VNN1O95497 513 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 HRH2P25021 359 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 GPR17Q13304 367 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 WSCD2Q2TBF2 565 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 OR4K14Q8NGD5 310 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 WDR92Q96MX6 357 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM109Q9BVC6 243 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 ZNF350Q9GZX5 532 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 DPAGT1Q9H3H5 408 aa15.21■□□□□ 0.02
NUCKS1-201ENST00000367142 CHRNB2P17787 502 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 RPS15P62841 145 aaKnown RBP15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 ARSKQ6UWY0 536 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 ERN2Q76MJ5 926 aaKnown RBP15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 LIX1LQ8IVB5 337 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 IL4I1Q96RQ9 567 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 IFI30P13284 250 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 CD36P16671 472 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 NPTX1Q15818 432 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 PLEKHG6Q3KR16 790 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 FAM156AQ8NDB6 213 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 OR10Q1Q8NGQ4 319 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 KCNN1Q92952 543 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 RAB7BQ96AH8 199 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 RAD9AQ99638 391 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 MALLQ13021 153 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 ADAM15Q13444 863 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 ODF4Q2M2E3 257 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 CGREF1Q99674 301 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM168Q9H0V1 697 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 IRF2BPLQ9H1B7 796 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 IL21RQ9HBE5 538 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 A8MT66 165 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 ACOT7O00154 380 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 EBLN1P0CF75 366 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 CDH11P55287 796 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 DNASE1L3Q13609 305 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 SH3PXD2AQ5TCZ1 1133 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 LAS2Q8IYD9 372 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 ZNF461Q8TAF7 563 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 LRRC58Q96CX6 371 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 TELO2Q9Y4R8 837 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 HLA-DPB1P04440 258 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 FLYWCH1Q4VC44 716 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 LY6G5CQ5SRR4 150 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 OR2T5Q6IEZ7 315 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 OR2T29Q8NH02 315 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 GRPEL2Q8TAA5 225 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 OSTF1Q92882 214 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 FTSJ1Q9UET6 329 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 REXO2Q9Y3B8 237 aaKnown RBP15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 WDR45Q9Y484 360 aa15.2■□□□□ 0.02
NUCKS1-201ENST00000367142 C13orf42A0A1B0GVH6 325 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 LOC730098B7Z3J9 87 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SHOX2O60902 331 aaPredicted RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 RAB28P51157 221 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 OR2B6P58173 313 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 FBXO43Q4G163 708 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 KBTBD6Q86V97 674 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 NPAS3Q8IXF0 933 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 TIGD4Q8IY51 512 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 OR4F6Q8NGB9 312 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SMARCD2Q92925 531 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 ZC3H10Q96K80 434 aaKnown RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 AKTIPQ9H8T0 292 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 PEX2P28328 305 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 PLCXD2Q0VAA5 305 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SGCAQ16586 387 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 ARHGAP12Q8IWW6 846 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SPAG16Q8N0X2 631 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 AQP11Q8NBQ7 271 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SHKBP1Q8TBC3 707 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 ELP5Q8TE02 316 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 TM9SF4Q92544 642 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms