RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ST6GAL2Q96JF0 529 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 TCF25Q9BQ70 676 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 CCDC59Q9P031 241 aaKnown RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 DNMT3AQ9Y6K1 912 aaPredicted RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 PLXNA3P51805 1871 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 C2orf78A6NCI8 922 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 CSF2P04141 144 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 IGFBP1P08833 259 aaPredicted RBP13.07□□□□□ -0.32
PRKN-205ENST00000366897 PRPS1L1P21108 318 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 SOX6P35712 828 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 RPS19P39019 145 aaKnown RBP13.07□□□□□ -0.32
PRKN-205ENST00000366897 LEXMQ3ZCV2 418 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 ZNF517Q6ZMY9 492 aaPredicted RBP13.07□□□□□ -0.32
PRKN-205ENST00000366897 SLC44A2Q8IWA5 706 aaPredicted RBP13.07□□□□□ -0.32
PRKN-205ENST00000366897 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 OR5AK3PQ8NH89 298 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 DNAJB8Q8NHS0 232 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 TRMT61AQ96FX7 289 aaKnown RBP13.07□□□□□ -0.32
PRKN-205ENST00000366897 EPYCQ99645 322 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 DUSP26Q9BV47 211 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 BARHL1Q9BZE3 327 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 CLEC2DQ9UHP7 191 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 CD84Q9UIB8 345 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 GABRR3A8MPY1 467 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 NOTOA8MTQ0 251 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 CSKP41240 450 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 NKX3-2P78367 333 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 C5orf22Q49AR2 442 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 ZNF544Q6NX49 715 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 TRIM48Q8IWZ4 208 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 APCDD1Q8J025 514 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 NXPE1Q8N323 547 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 LINC01599Q8WXQ3 324 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 TRIM39Q9HCM9 518 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 C11orf16Q9NQ32 467 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 GPSM3Q9Y4H4 160 aa13.07□□□□□ -0.32
PRKN-205ENST00000366897 CENPXA8MT69 81 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ASGR1P07306 291 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.324e-6■■■■■ 40.4
PRKN-205ENST00000366897 SSTR4P31391 388 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 B4GALNT1Q00973 533 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 MTAPQ13126 283 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 CAMK2BQ13554 666 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 RGNQ15493 299 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ATP13A5Q4VNC0 1218 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 Q5BKY6 102 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 WDR53Q7Z5U6 358 aaPredicted RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 DOHHQ9BU89 302 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 OR2B2Q9GZK3 357 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 SMURF1Q9HCE7 757 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 RANGRFQ9HD47 186 aaPredicted RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 NUFIP1Q9UHK0 495 aaKnown RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 MKLN1Q9UL63 735 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 PCDHB11Q9Y5F2 797 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 NPIPB15A6NHN6 443 aaPredicted RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 TPD52L2O43399 206 aaKnown RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 SOX14O95416 240 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ZDHHC11BP0C7U3 371 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 GABRB1P18505 474 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 MAPK1P28482 360 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 IRF8Q02556 426 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ACSM2AQ08AH3 577 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ACSM2BQ68CK6 577 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ERICH5Q6P6B1 374 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ATCAYQ86WG3 371 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 C1orf52Q8N6N3 182 aaKnown RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 MCCC1Q96RQ3 725 aaPredicted RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 ASPNQ9BXN1 380 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 FKBP14Q9NWM8 211 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 KLHL20Q9Y2M5 609 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 A0A1W2PQ09 198 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 LRRTM2O43300 516 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 MRPS14O60783 128 aaKnown RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 CD83Q01151 205 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 CSTF3Q12996 717 aaKnown RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
PRKN-205ENST00000366897 XKR6Q5GH73 641 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 PAQR6Q6TCH4 344 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 FAM129BQ96TA1 746 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 CRISPLD2Q9H0B8 497 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 ABCB8Q9NUT2 735 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 DNAJC27Q9NZQ0 273 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 SCN10AQ9Y5Y9 1956 aa13.06□□□□□ -0.32
PRKN-205ENST00000366897 EFCAB10A6NFE3 127 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 E9PQ18 207 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 CCRL2O00421 344 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 HIST1H2AGP0C0S8 130 aaPredicted RBP13.05□□□□□ -0.32
PRKN-205ENST00000366897 HIST1H2ADP20671 130 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 CNR2P34972 360 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 GPR50Q13585 617 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 TSTA3Q13630 321 aaPredicted RBP13.05□□□□□ -0.32
PRKN-205ENST00000366897 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
PRKN-205ENST00000366897 CCDC58Q4VC31 144 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 ADGRF1Q5T601 910 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 LYPD8Q6UX82 237 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 MACC1Q6ZN28 852 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 NLRP8Q86W28 1048 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms