RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PTCHD3Q3KNS1 767 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF569Q5MCW4 686 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 CCDC183Q5T5S1 534 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 HIST2H2BCQ6DN03 193 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 IRGCQ6NXR0 463 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZDHHC24Q6UX98 284 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 CLEC18BQ6UXF7 455 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF66Q6ZN08 573 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 FAM92BQ6ZTR7 304 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 PTCHD4Q6ZW05 846 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 B4GALNT4Q76KP1 1039 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 ADGRG6Q86SQ4 1221 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 LRRC49Q8IUZ0 686 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 LURAP1LQ8IV03 231 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 WDR75Q8IWA0 830 aaKnown RBP5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 CCDC13Q8IYE1 715 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 PQLC3Q8N755 202 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 TEX19Q8NA77 164 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 KCTD6Q8NC69 237 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 CLEC18CQ8NCF0 446 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 GPR26Q8NDV2 337 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 FAM71BQ8TC56 605 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 RSC1A1Q92681 617 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 MIB2Q96AX9 1013 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 STAMBPL1Q96FJ0 436 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 TSGA13Q96PP4 275 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 LYSMD1Q96S90 227 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 RUFY1Q96T51 708 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 MACROD1Q9BQ69 325 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 ADGRE3Q9BY15 652 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 NAT10Q9H0A0 1025 aaKnown RBP5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 CARD9Q9H257 536 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 HAUS2Q9NVX0 235 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 RCOR3Q9P2K3 495 aaPredicted RBP5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 RPL26L1Q9UNX3 145 aaKnown RBP5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 HEY1Q9Y5J3 304 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 PTPN13Q12923 2485 aa5.04□□□□□ -1.6
RNU4-4P-201ENST00000364588 RGSL1A5PLK6 1076 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 SMTNL1A8MU46 457 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 MKRN2OSH3BPM6 223 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 AP4M1O00189 453 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 PPP6CO00743 305 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CES2O00748 559 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CHUKO15111 745 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 KMOO15229 486 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 PMPCBO75439 489 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 SPAG6O75602 509 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CREG1O75629 220 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CDK14O94921 469 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 SERPING1P05155 500 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF7P17097 686 aaPredicted RBP5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 TPH1P17752 444 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 XRCC1P18887 633 aaPredicted RBP5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 FPR3P25089 353 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CASP14P31944 242 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CAPZBP47756 277 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 UQCRFS1P47985 274 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CLCNKAP51800 687 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 PGDP52209 483 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 RPS18P62269 152 aaKnown RBP5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 PPIDQ08752 370 aaKnown RBP5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 AP1B1Q10567 949 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CHAF1BQ13112 559 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 DNASE1L3Q13609 305 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 GPR18Q14330 331 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 IL11RAQ14626 422 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 KCNAB1Q14722 419 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 PDK2Q15119 407 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF750Q32MQ0 723 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 MORN5Q5VZ52 161 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ALKBH5Q6P6C2 394 aaKnown RBP5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ASB18Q6ZVZ8 466 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 LRRTM4Q86VH4 590 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 TRAPPC5Q8IUR0 188 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF547Q8IVP9 402 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 MAP7D3Q8IWC1 876 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 TTC30BQ8N4P2 665 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 TRAM1L1Q8N609 369 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 AVL9Q8NBF6 648 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 SPATA22Q8NHS9 363 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 GDAP1Q8TB36 358 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CT55Q8WUE5 264 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 RAPGEF5Q92565 580 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 GLYATL1Q969I3 302 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 HDAC11Q96DB2 347 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 CXorf40BQ96DE9 158 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 RITA1Q96K30 269 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF830Q96NB3 372 aaPredicted RBP5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 AGAP3Q96P47 875 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 TRIB3Q96RU7 358 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZNF670Q9BS34 389 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 ZSCAN5AQ9BUG6 496 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 SLC29A3Q9BZD2 475 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 GPR63Q9BZJ6 419 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 TWSG1Q9GZX9 223 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 AKIRIN1Q9H9L7 192 aaPredicted RBP5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 UCK1Q9HA47 277 aa5.03□□□□□ -1.6
RNU4-4P-201ENST00000364588 BPIFA1Q9NP55 256 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms