RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 GPR137CQ8N3F9 429 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 GUF1Q8N442 669 aaKnown RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 ZNF433Q8N7K0 673 aaPredicted RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 GBP7Q8N8V2 638 aaPredicted RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 RASGEF1AQ8N9B8 481 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 NOA1Q8NC60 698 aaKnown RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 OR10S1Q8NGN2 331 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 OR6F1Q8NGZ6 308 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 LPGAT1Q92604 370 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 HDAC2Q92769 488 aaKnown RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 FAF2Q96CS3 445 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 NXPE2Q96DL1 559 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 SPACA9Q96E40 222 aaPredicted RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 CCDC34Q96HJ3 373 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 IMMP1LQ96LU5 166 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 SCLT1Q96NL6 688 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 BTBD9Q96Q07 612 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 PAFAH2Q99487 392 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 NDNQ99608 321 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 MXD3Q9BW11 206 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 OPA3Q9H6K4 179 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 PATZ1Q9HBE1 687 aaKnown RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 DNAJC4Q9NNZ3 241 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 SLC35C2Q9NQQ7 365 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 CRNNQ9UBG3 495 aaPredicted RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 POLLQ9UGP5 575 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 IL36AQ9UHA7 158 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 UBQLN2Q9UHD9 624 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 PGAP2Q9UHJ9 254 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 RNF150Q9ULK6 438 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 RAB26Q9ULW5 256 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 ZFP37Q9Y6Q3 630 aaPredicted RBP0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 HMCN1Q96RW7 5635 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 NPHP3Q7Z494 1330 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 ARHGAP23Q9P227 1491 aa0.35□□□□□ -2.35
RNU4-58P-201ENST00000363192 TRAV24A0A0B4J272 114 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 LOC390937A0A1W2PQ73 354 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 BCLAF3A2AJT9 711 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 IGLON5A6NGN9 336 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 CCT8L1PA6NM43 557 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ZNF487B1APH4 448 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 C17orf105B2RV13 164 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 B4E171 279 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 TRIM77I1YAP6 450 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SCO2O43819 266 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SNX3O60493 162 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 APBB3O95704 486 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 TBX18O95935 607 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SCGB1D1O95968 90 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 PSG2P11465 335 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ZNF44P15621 663 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 RPS2P15880 293 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 CYP11B2P19099 503 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 AXLP30530 894 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SPRP35270 261 aaPredicted RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 PMELP40967 661 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 TSPAN7P41732 249 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 HMGCS2P54868 508 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ADARP55265 1226 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 POLR2LP62875 67 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 PAX2Q02962 417 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 LRRC63Q05C16 580 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 CUL3Q13618 768 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ZNF691Q5VV52 312 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 OTPQ5XKR4 325 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 CTR9Q6PD62 1173 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 Q6ZVQ6 151 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 NUFIP2Q7Z417 695 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SYVN1Q86TM6 617 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ZNF589Q86UQ0 364 aaPredicted RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 LYPD1Q8N2G4 141 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 BANPQ8N9N5 519 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 OR2L5Q8NG80 312 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 IL22RA2Q969J5 263 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 MOB3AQ96BX8 217 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 NSUN4Q96CB9 384 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 HDAC11Q96DB2 347 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SIPA1Q96FS4 1042 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 VSIG2Q96IQ7 327 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 RBM41Q96IZ5 413 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 RCHY1Q96PM5 261 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ALKBH3Q96Q83 286 aaPredicted RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 TNFRSF13CQ96RJ3 184 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 CCT8L2Q96SF2 557 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 IL12RB2Q99665 862 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 HSD17B14Q9BPX1 270 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SDCBP2Q9H190 292 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 LIME1Q9H400 295 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ACTL8Q9H568 366 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 CDH20Q9HBT6 801 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 GSN-AS1Q9NRJ2 163 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SEPT11Q9NVA2 429 aaKnown RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ARHGEF38Q9NXL2 777 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 PSD3Q9NYI0 1048 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 SUCLA2Q9P2R7 463 aaPredicted RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 ORC3Q9UBD5 711 aaPredicted RBP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 NEU3Q9UQ49 428 aa0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 NIP7Q9Y221 180 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU4-58P-201ENST00000363192 CPQQ9Y646 472 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms