RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RACK1P63244 317 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FAM189A2Q15884 450 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 DUSP6Q16828 381 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SLC25A52Q3SY17 297 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CLEC12AQ5QGZ9 265 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RETSATQ6NUM9 610 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 DHRS4L2Q6PKH6 230 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 BLOC1S3Q6QNY0 202 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 WASH2PQ6VEQ5 465 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 BEST3Q8N1M1 668 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RAD51AP1Q96B01 352 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 MYO19Q96H55 970 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RPS10P5Q9NQ39 176 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 KCNIP3Q9Y2W7 256 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PCDHB1Q9Y5F3 818 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ARHGAP32A7KAX9 2087 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ARVCFO00192 962 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RPL9P32969 192 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TPMTP51580 245 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GTPBP8Q8N3Z3 284 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 OR7G3Q8NG95 312 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SLC9A6Q92581 669 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CDCA5Q96FF9 252 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 INIPQ9NRY2 104 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PCDHB5Q9Y5E4 795 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PAGE1O75459 146 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TP53P04637 393 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 IL3P08700 152 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ANXA4P09525 319 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 HLA-EP13747 358 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CASP9P55211 416 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TAS2R43P59537 309 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ATCAYQ86WG3 371 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TOP6BLQ8N6T0 577 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SLC43A3Q8NBI5 491 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NECAB3Q96P71 396 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FTHL17Q9BXU8 183 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 MROH8Q9H579 483 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 EXO5Q9H790 373 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TMPRSS4Q9NRS4 437 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ACANP16112 2415 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CLDN24A6NM45 220 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 M0R2N6 131 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 IGSF6O95976 241 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC35E2BP0CK96 405 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MAPK3P27361 379 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CHRNA4P43681 627 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 GALNT1Q10472 559 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SCGB2B2Q4G0G5 96 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 C22orf42Q6IC83 251 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 RBFAQ8N0V3 343 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PLD6Q8N2A8 252 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PPP1R14AQ96A00 147 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TM9SF2Q99805 663 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC9A3R1O14745 358 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 NUDT7P0C024 238 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 AGXTP21549 392 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 DIO3P55073 304 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ST8SIA6P61647 398 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MPPE1Q53F39 396 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MTFR2Q6P444 385 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FAM151BQ6UXP7 276 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 NT5DC2Q9H857 520 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 IKZF2Q9UKS7 526 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SNX10Q9Y5X0 201 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MYLKQ15746 1914 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SPATA31A3Q5VYP0 1347 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 BHMG1C9JSJ3 638 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ARL6IP5O75915 188 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 C1RP00736 705 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CTPS1P17812 591 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 EDNRAP25101 427 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MAPK9P45984 424 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 DGKGP49619 791 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 KCTD9Q7L273 389 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SSX9Q7RTT3 188 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 LURAP1Q96LR2 239 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CDT1Q9H211 546 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OR51V1Q9H2C8 321 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC38A1Q9H2H9 487 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ERVMER34-1Q9H9K5 563 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FBRSL1Q9HCM7 1045 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SDHAF2Q9NX18 166 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TIMM13Q9Y5L4 95 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 GRXCR2A6NFK2 248 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 DDTLA6NHG4 134 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SULT1C2O00338 296 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC43A1O75387 559 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 EPOP01588 193 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TLX1P31314 330 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ZMYND11Q15326 602 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PHACTR4Q8IZ21 702 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 LSMEM1Q8N8F7 131 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 GAL3ST1Q99999 423 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC28A3Q9HAS3 691 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 DNMT3LQ9UJW3 386 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 A0A0G2JMP0 313 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 POM121CA8CG34 1229 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SEPT4O43236 478 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms