RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 EXOC3L2Q2M3D2 409 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 LEXMQ3ZCV2 418 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CNKSR3Q6P9H4 555 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SERPINA11Q86U17 422 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 TMC8Q8IU68 726 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CHPFQ8IZ52 775 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ECHDC3Q96DC8 303 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CEP295NLQ96MC4 621 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 RDH12Q96NR8 316 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ABCG4Q9H172 646 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 OSGEPL1Q9H4B0 414 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 MAGIXQ9H6Y5 334 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 TMED5Q9Y3A6 229 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 COL4A4P53420 1690 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 FEZF1A0PJY2 475 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 GLOD5A6NK44 160 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 AIREO43918 545 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 OLFM2O95897 454 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 C9P02748 559 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CCDC159P0C7I6 412 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 JUNBP17275 347 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 GPX2P18283 190 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 PTNP21246 168 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 PCMT1P22061 227 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 LIPAP38571 399 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 BCAP31P51572 246 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SLC35A2P78381 396 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SLC7A9P82251 487 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CBX3Q13185 183 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SCARB2Q14108 478 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SLC5A12Q1EHB4 618 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 FNDC3BQ53EP0 1204 aaKnown RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 KDM4DQ6B0I6 523 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CAPN13Q6MZZ7 669 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 CBLL1Q75N03 491 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ZNF605Q86T29 641 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 RNF168Q8IYW5 571 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 HPS1Q92902 700 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 EXOSC8Q96B26 276 aaKnown RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 MCCC1Q96RQ3 725 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 CCM2Q9BSQ5 444 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 YIPF4Q9BSR8 244 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 TPK1Q9H3S4 243 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 GPN2Q9H9Y4 310 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 ZNF556Q9HAH1 456 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ACOT13Q9NPJ3 140 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 C11orf16Q9NQ32 467 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 FAM120CQ9NX05 1096 aaKnown RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 IL36AQ9UHA7 158 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 MICAL3Q7RTP6 2002 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SZT2Q5T011 3432 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CNTRLQ7Z7A1 2325 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SMIM30A4D0T7 59 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SYNDIG1LA6NDD5 238 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 AGAP14A8MT82 685 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 A8MU76 341 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 H3BN98 237 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 SLC16A6O15403 523 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 KDM1AO60341 852 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CBFA2T3O75081 653 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 POP7O75817 140 aaKnown RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 IL3P08700 152 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 IGFBP1P08833 259 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 BMP4P12644 408 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 GADD45AP24522 165 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 GTF2E2P29084 291 aaKnown RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 RAE1P78406 368 aaKnown RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 RELAQ04206 551 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 PPIGQ13427 754 aaKnown RBP eCLIP7.94□□□□□ -1.142e-9■■□□□ 11.8
CD46-205ENST00000358170 LIPJQ5W064 366 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ERAP2Q6P179 960 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 BRAT1Q6PJG6 821 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 DSG4Q86SJ6 1040 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 FAM217AQ8IXS0 508 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ENTHD1Q8IYW4 607 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 TRUB1Q8WWH5 349 aaKnown RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 LZICQ8WZA0 190 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 LYSMD1Q96S90 227 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 KLHL25Q9H0H3 589 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 DCSTAMPQ9H295 470 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 TMEM45AQ9NWC5 275 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 RNF6Q9Y252 685 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ERGIC3Q9Y282 383 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 ZNF510Q9Y2H8 683 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 AP3M1Q9Y2T2 418 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 CAB39Q9Y376 341 aaPredicted RBP7.94□□□□□ -1.14
CD46-205ENST00000358170 PCDHGB3Q9Y5G1 929 aa7.94□□□□□ -1.14
CD46-205ENST00000358170 C5orf58C9J3I9 102 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 GFRA2O00451 464 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 CYP7B1O75881 506 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 APOL3O95236 402 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 LATS1O95835 1130 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 DLGAP3O95886 979 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 INHBBP09529 407 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 EPCAMP16422 314 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 ZNF12P17014 697 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 ALOX12P18054 663 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 ITIH1P19827 911 aa7.93□□□□□ -1.14
CD46-205ENST00000358170 TIA1P31483 386 aaKnown RBP eCLIP7.93□□□□□ -1.143e-8■■■■■ 27.7
CD46-205ENST00000358170 RYKP34925 604 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms