RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 DNAJC11Q9NVH1 559 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 GIMAP2Q9UG22 337 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 TSR3Q9UJK0 312 aaKnown RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 CNOT6Q9ULM6 557 aaKnown RBP7.9□□□□□ -1.14
CD44-205ENST00000352818 FZD4Q9ULV1 537 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 SNX6Q9UNH7 406 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
CD44-205ENST00000352818 POLEQ07864 2286 aa7.9□□□□□ -1.15
CD44-205ENST00000352818 C17orf113A0A1B0GUU1 675 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 PRORSD1PA6NEY8 169 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 CCDC154A6NI56 674 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 AQP12BA6NM10 295 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 EFCAB7A8K855 629 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ARHGEF33A8MVX0 844 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 D6RAR5 112 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 TSPAN6O43657 245 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 VEGFDO43915 354 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ULK1O75385 1050 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 RSL1D1O76021 490 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 RECQL5O94762 991 aaPredicted RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 STAMBPO95630 424 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 BAG2O95816 211 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 CATP04040 527 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 JMJD7P0C870 316 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 PRKAR1AP10644 381 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 SLC6A2P23975 617 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 TEAD1P28347 426 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 IL12AP29459 219 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 CCKBRP32239 447 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 DRD3P35462 400 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 SLC7A2P52569 658 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 HNRNPFP52597 415 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 GTF2A1P52655 376 aaPredicted RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 CTSCP53634 463 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 PNLIPRP1P54315 467 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 EEFSECP57772 596 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 TMEM115Q12893 351 aaPredicted RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 DEFB133Q30KQ1 61 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 DEFB109BQ30KR1 87 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 PTCHD3Q3KNS1 767 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 VPS26BQ4G0F5 336 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 SYTL3Q4VX76 610 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 FAM46CQ5VWP2 391 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 LIPJQ5W064 366 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 TCTN3Q6NUS6 607 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 IRGCQ6NXR0 463 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ADAMTSL4Q6UY14 1074 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 MBOAT1Q6ZNC8 495 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ASB18Q6ZVZ8 466 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 DET1Q7L5Y6 550 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 VRK3Q8IV63 474 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 MMAAQ8IVH4 418 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 AQP12AQ8IXF9 295 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 KBTBD2Q8IY47 623 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 PROKR1Q8TCW9 393 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 NAT14Q8WUY8 206 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 APOBEC4Q8WW27 367 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 TMEM159Q96B96 161 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 LRRC58Q96CX6 371 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 KLHDC7BQ96G42 594 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 METTL2AQ96IZ6 378 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 FCRL1Q96LA6 429 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 CCDC138Q96M89 665 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ECSITQ9BQ95 431 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 KLHL4Q9C0H6 718 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ACTR8Q9H981 624 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 BATF3Q9NR55 127 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 GPR27Q9NS67 375 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ADA2Q9NZK5 511 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 KLQ9UEF7 1012 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 RIMS3Q9UJD0 308 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 SCML1Q9UN30 329 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 GPR34Q9UPC5 381 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 EIF3LQ9Y262 564 aaKnown RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 ITM2BQ9Y287 266 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 AP3M1Q9Y2T2 418 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 TMED5Q9Y3A6 229 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 POLR3HQ9Y535 204 aaPredicted RBP7.89□□□□□ -1.15
CD44-205ENST00000352818 PCDHA9Q9Y5H5 950 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 ANKRD12Q6UB98 2062 aa7.89□□□□□ -1.15
CD44-205ENST00000352818 KLHL33A6NCF5 533 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 NME4O00746 187 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 MTX2O75431 263 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 PRPS2P11908 318 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 HSD3B1P14060 373 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 HSD3B2P26439 372 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 VARSP26640 1264 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 MAP4P27816 1152 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 MAPK1P28482 360 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 SLC7A1P30825 629 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 ARL1P40616 181 aaPredicted RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 CASP2P42575 452 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 GDF5P43026 501 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 GNPDA1P46926 289 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 CLNS1AP54105 237 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 KRTAP10-9P60411 292 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 PFN3P60673 137 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 UFM1P61960 85 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 RPL38P63173 70 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 MRPS22P82650 360 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms