RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PCDHGB3Q9Y5G1 929 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 BTN3A3O00478 584 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PRLP01236 227 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PIPP12273 146 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ZNF250P15622 560 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 RPS3P23396 243 aaKnown RBP eCLIP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 HMGCLP35914 325 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 CRYBB2P43320 205 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 GTF2H2Q13888 395 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 GALEQ14376 348 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 VMACQ2NL98 169 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 SLC39A12Q504Y0 691 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 USP39Q53GS9 565 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 GTF2H2CQ6P1K8 395 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 MSANTD1Q6ZTZ1 278 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PLEKHM3Q6ZWE6 761 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 USP50Q70EL3 339 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 KRTCAP2Q8N6L1 136 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ZNF680Q8NEM1 530 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 OR4K2Q8NGD2 314 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 IGSF8Q969P0 613 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 SLC25A46Q96AG3 418 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ULK4Q96C45 1275 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 LINGO1Q96FE5 620 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 C7orf34Q96L11 122 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PAAF1Q9BRP4 392 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 MARVELD1Q9BSK0 173 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 CCM2Q9BSQ5 444 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 PPA2Q9H2U2 334 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 ABCB9Q9NP78 766 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 EXOSC4Q9NPD3 245 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 SNTG1Q9NSN8 517 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 MCUBQ9NWR8 336 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 MS4A12Q9NXJ0 267 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 TAS2R16Q9NYV7 291 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 SH3BP4Q9P0V3 963 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 UTRNP46939 3433 aa9.95□□□□□ -0.82
CHRNA1-202ENST00000348749 BPTFQ12830 3046 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 HYKKA2RU49 373 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 A8MVJ9 347 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 H3BM21 787 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 SERPINI2O75830 405 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 GLUD1P00367 558 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 IL1AP01583 271 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ADRA2AP08913 450 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 TSPAN19P0C672 248 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ZNF865P0CJ78 1059 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 PTX3P26022 381 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 OR1E1P30953 314 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 S100A3P33764 101 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 PGFP49763 221 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ETV1P50549 477 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 AFF1P51825 1210 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 B2MP61769 119 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 AANATQ16613 207 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 PYDC2Q56P42 97 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 PLAG1Q6DJT9 500 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 NADSYN1Q6IA69 706 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 BRAT1Q6PJG6 821 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 DOK6Q6PKX4 331 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 SUSD1Q6UWL2 747 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 TRIM46Q7Z4K8 759 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 GPAT4Q86UL3 456 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 CDH24Q86UP0 819 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ADGRG3Q86Y34 549 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 RASAL3Q86YV0 1011 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 GHDCQ8N2G8 530 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 WDR36Q8NI36 951 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 VANGL1Q8TAA9 524 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 CREB3L4Q8TEY5 395 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 EEF1AKMT1Q8WVE0 214 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 AKAP1Q92667 903 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 LPPQ93052 612 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 MSANTD3Q96H12 275 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 RPRD1AQ96P16 312 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 QRFPRQ96P65 431 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 INPP5KQ9BT40 448 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 SYNDIG1Q9H7V2 258 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 LRTM1Q9HBL6 345 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ZMAT5Q9UDW3 170 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 PHF11Q9UIL8 331 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 LSM2Q9Y333 95 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 DHRS7Q9Y394 339 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 AP1M2Q9Y6Q5 423 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 TRPM7Q96QT4 1865 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 SMLR1H3BR10 107 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 TOR1AO14656 332 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ORC5O43913 435 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 TNFRSF21O75509 655 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 OAZ2O95190 189 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 CYP17A1P05093 508 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 TPOP07202 933 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 FHP07954 510 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 HOXD4P09016 255 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 PRKAR1AP10644 381 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ANXA8P13928 327 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 ARSBP15848 533 aa9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 PSMA1P25786 263 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 IDH2P48735 452 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-202ENST00000348749 CLDN8P56748 225 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms