RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 NANSQ9NR45 359 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 GSK3BP49841 420 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 NUP98P52948 1817 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 TSPAN15O95858 294 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 SCNN1AP37088 669 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 IL17AQ16552 155 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 KIAA1324Q6UXG2 1013 aaKnown RBP18.78■□□□□ 0.6
HDAC4-201ENST00000345617 PXKQ7Z7A4 578 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 ALPK1Q96QP1 1244 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 GRHPRQ9UBQ7 328 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 TRBC2A0A5B9 178 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 NFATC1O95644 943 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 CD79BP40259 229 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 OR2T33Q8NG76 320 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 TRAPPC12Q8WVT3 735 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 KCTD13Q8WZ19 329 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 CCDC120Q96HB5 630 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 RGPD8O14715 1765 aaPredicted RBP18.78■□□□□ 0.6
HDAC4-201ENST00000345617 CORO1AP31146 461 aaKnown RBP18.78■□□□□ 0.6
HDAC4-201ENST00000345617 FOXN2P32314 431 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 SAMD7Q7Z3H4 446 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 HTRA2O43464 458 aaPredicted RBP18.78■□□□□ 0.6
HDAC4-201ENST00000345617 TRAM2Q15035 370 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 POM121L1PQ3SYA9 428 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 CEACAM20Q6UY09 585 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 TMEM150CB9EJG8 249 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 FNTBP49356 437 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 HSD11B2P80365 405 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 ARSHQ5FYA8 562 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 ATAD3CQ5T2N8 411 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 PNCKQ6P2M8 343 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 SIDT2Q8NBJ9 832 aaKnown RBP18.78■□□□□ 0.6
HDAC4-201ENST00000345617 CMTM7Q96FZ5 175 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 NID2Q14112 1375 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3DA0A087WVF3 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3IA0A087WXS9 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3EA0A087X179 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3KA0A087X1G2 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3FA6NER0 549 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3LB9A6J9 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 PDHXO00330 501 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 IRAK2O43187 625 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 RBBP9O75884 186 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3HP0C7X1 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 SPATA31C1P0DKV0 1188 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 LASP1Q14847 261 aaKnown RBP18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3GQ6DHY5 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3CQ6IPX1 549 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 POMZP3Q6PJE2 187 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TBC1D3Q8IZP1 549 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-201ENST00000345617 ACSL5Q9ULC5 683 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 A0A1W2PQH9 124 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 PKP2Q99959 881 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 PCDHB11Q9Y5F2 797 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 DIDO1Q9BTC0 2240 aaKnown RBP18.77■□□□□ 0.6
HDAC4-201ENST00000345617 LRRC72A6NJI9 287 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 APODP05090 189 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 GK2Q14410 553 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-201ENST00000345617 CYBRD1Q53TN4 286 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 AMZ2Q86W34 360 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 RELL1Q8IUW5 271 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 DERL2Q9GZP9 239 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 FZD10Q9ULW2 581 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 IFNGR1P15260 489 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 S100A7P31151 101 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 EN1Q05925 392 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-201ENST00000345617 RAB31Q13636 194 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 GAS6Q14393 721 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 SLC27A4Q6P1M0 643 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 MROH1Q8NDA8 1641 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 PRMT2P55345 433 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 EMX2Q04743 252 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 CHAF1BQ13112 559 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 IFNLR1Q8IU57 520 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-201ENST00000345617 GLIS3Q8NEA6 775 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 PWWP2AQ96N64 755 aa18.77■□□□□ 0.6
HDAC4-201ENST00000345617 TLX2O43763 284 aaPredicted RBP18.77■□□□□ 0.59
HDAC4-201ENST00000345617 SNAPINO95295 136 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 TIFABQ6ZNK6 161 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 ZSCAN4Q8NAM6 433 aaPredicted RBP18.77■□□□□ 0.59
HDAC4-201ENST00000345617 SRMSQ9H3Y6 488 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 ZDHHC18Q9NUE0 388 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 TMEM39AQ9NV64 488 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 ARMC1Q9NVT9 282 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 SNTA1Q13424 505 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 PTCHD3Q3KNS1 767 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 BRAT1Q6PJG6 821 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 FAM129CQ86XR2 697 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 EBF4Q9BQW3 602 aa18.77■□□□□ 0.59
HDAC4-201ENST00000345617 A0A1W2PQ45 241 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-201ENST00000345617 A0A1W2PQY0 241 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF550Q7Z398 422 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 OR14A2Q96R54 314 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 YIPF4Q9BSR8 244 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 NMUR1Q9HB89 426 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 GFOD1Q9NXC2 390 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 FAM186AA6NE01 2351 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 PRKACAP17612 351 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 CASRP41180 1078 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms