RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 EEF1E1-BLOC1S5C9J1V9 151 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 OPN1SWP03999 348 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 MGST1P10620 155 aaKnown RBP12.46□□□□□ -0.42
USP47-202ENST00000339865 VEGFCP49767 419 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 TAS2R40P59535 323 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 RPS14P62263 151 aaKnown RBP12.46□□□□□ -0.42
USP47-202ENST00000339865 NOMO3P69849 1222 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 GAD2Q05329 585 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 NOMO1Q15155 1222 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 FSTL4Q6MZW2 842 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 FCRL2Q96LA5 508 aaPredicted RBP12.46□□□□□ -0.42
USP47-202ENST00000339865 B3GAT2Q9NPZ5 323 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 PCDHB14Q9Y5E9 798 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 CDC42BPBQ9Y5S2 1711 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 TBX10O75333 385 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 RCBTB2O95199 551 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 GJA5P36382 358 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 SERPINF1P36955 418 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 ZNF367Q7RTV3 350 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 OR51D1Q8NGF3 324 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 MRPS30Q9NP92 439 aaKnown RBP12.46□□□□□ -0.42
USP47-202ENST00000339865 CA5BQ9Y2D0 317 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 INO80Q9ULG1 1556 aaPredicted RBP12.46□□□□□ -0.42
USP47-202ENST00000339865 USP6P35125 1406 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 PTPRJQ12913 1337 aa12.46□□□□□ -0.42
USP47-202ENST00000339865 A0A1W2PPL8 197 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 ENGP17813 658 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 DPYSL2Q16555 572 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 ZPBP2Q6X784 338 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 Q8N9G6 341 aaPredicted RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 MYLIPQ8WY64 445 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 KIAA1522Q9P206 1035 aaPredicted RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 RAI2Q9Y5P3 530 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 FAM155AB1AL88 458 aaPredicted RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 TISP43B9A030 160 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 MT-CO2P00403 227 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 PRPS2P11908 318 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 MAP2K3P46734 347 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 SLC29A4Q7RTT9 530 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 ZNF675Q8TD23 568 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 C7orf26Q96N11 449 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 DUSP9Q99956 384 aaKnown RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 AKR1C2P52895 323 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 ERVK-21P61565 698 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 GRM3Q14832 879 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 PGM5Q15124 567 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 MEP1AQ16819 746 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 PIGZQ86VD9 579 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 IL22RA1Q8N6P7 574 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 MOAP1Q96BY2 351 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 AURKBQ96GD4 344 aaPredicted RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 WDR62O43379 1518 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 RNF13O43567 381 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 CEACAM20Q6UY09 585 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 FAM46DQ8NEK8 389 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 OR13C3Q8NGS6 347 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 LRCH3Q96II8 777 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 COQ10AQ96MF6 247 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 CMKLR1Q99788 373 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 NIFKQ9BYG3 293 aaKnown RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 SDHAF3Q9NRP4 125 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 SRRDQ9UH36 339 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 GOSR2O14653 212 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 RFPL2O75678 378 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 SNAP29O95721 258 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 MLC1Q15049 377 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 OTOP1Q7RTM1 612 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 PXKQ7Z7A4 578 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 TCEANCQ8N8B7 351 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 DRAXINQ8NBI3 349 aaPredicted RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP47-202ENST00000339865 C1orf21Q9H246 121 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 TCEAL2Q9H3H9 227 aaPredicted RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 ADARB2Q9NS39 739 aaKnown RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 SACM1LQ9NTJ5 587 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 PPM1HQ9ULR3 514 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 RUVBL1Q9Y265 456 aaKnown RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 HEBP2Q9Y5Z4 205 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 MAP2K5Q13163 448 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 PGM2L1Q6PCE3 622 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 SGCZQ96LD1 299 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 RNF215Q9Y6U7 377 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 PCDH7O60245 1069 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 ARAFP10398 606 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 FASLGP48023 281 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 NRLP54845 237 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 CACNG1Q06432 222 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 SECISBP2Q96T21 854 aaKnown RBP12.45□□□□□ -0.42
USP47-202ENST00000339865 IGSF9Q9P2J2 1179 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 HES2Q9Y543 173 aa12.45□□□□□ -0.42
USP47-202ENST00000339865 CCDC88AQ3V6T2 1871 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 A0A1W2PRB8 838 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 AGPSO00116 658 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 MAGEB4O15481 346 aaPredicted RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 SLITRK3O94933 977 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 IL1AP01583 271 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms