RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 ZDHHC4Q9NPG8 344 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 DNAJC27Q9NZQ0 273 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 CITO14578 2027 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 K7ERQ8 282 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 LEFTY1O75610 366 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 GPX3P22352 226 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 GABARAPL2P60520 117 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 CSTF1Q05048 431 aaKnown RBP15.2■□□□□ 0.02
HDAC5-202ENST00000336057 PCBP2Q15366 365 aaKnown RBP eCLIP15.2■□□□□ 0.022e-7■■■■□ 22.5
HDAC5-202ENST00000336057 GPR68Q15743 365 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 PAGE3Q5JUK9 113 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 ACVR1CQ8NER5 493 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 TSEN15Q8WW01 171 aaKnown RBP15.2■□□□□ 0.02
HDAC5-202ENST00000336057 FAM129BQ96TA1 746 aa15.2■□□□□ 0.02
HDAC5-202ENST00000336057 SH3PXD2BA1X283 911 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 REM1O75628 298 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 CDRT1O95170 752 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 MT-ND2P03891 347 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 IGFBP4P22692 258 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 NDUFS1P28331 727 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 STARP49675 285 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 FADDQ13158 208 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TOMM20Q15388 145 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 C18orf21Q32NC0 220 aaPredicted RBP15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TMEM236Q5W0B7 351 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 ADGRD2Q7Z7M1 963 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TCEANCQ8N8B7 351 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 IRF7Q92985 503 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 GLYATL1Q969I3 302 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 GRK6P43250 576 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 SLC13A2Q13183 592 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 LRP8Q14114 963 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 CTC1Q2NKJ3 1217 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 RAB41Q5JT25 222 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 LARP4Q71RC2 724 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC5-202ENST00000336057 SCML4Q8N228 414 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 ZNF675Q8TD23 568 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 RAB8BQ92930 207 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TMEM125Q96AQ2 219 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 WASH4PA8MWX3 477 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 LDB2O43679 373 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 FOXD2O60548 495 aaPredicted RBP15.19■□□□□ 0.02
HDAC5-202ENST00000336057 GSRP00390 522 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 SERPINA3P01011 423 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 UQCRC2P22695 453 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 PMS2P3Q13401 168 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TTC9BQ8N6N2 239 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 C3orf58Q8NDZ4 430 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 OR56A1Q8NGH5 318 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 MZB1Q8WU39 189 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 ARNT2Q9HBZ2 717 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 CCDC59Q9P031 241 aaKnown RBP15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TMEM98Q9Y2Y6 226 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 INSL6Q9Y581 213 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 PCDHGA10Q9Y5H3 936 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 HLA-DPB1P04440 258 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 C1GALT1C1LP0DN25 315 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 KCNA5P22460 613 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 MAGEA3P43357 314 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 CDKN1CP49918 316 aaPredicted RBP15.19■□□□□ 0.02
HDAC5-202ENST00000336057 NPRL3Q12980 569 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 CD200R1Q8TD46 325 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 SPATA9Q9BWV2 254 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 ELL3Q9HB65 397 aaPredicted RBP15.19■□□□□ 0.02
HDAC5-202ENST00000336057 TMEM45AQ9NWC5 275 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 COL18A1P39060 1754 aa15.19■□□□□ 0.02
HDAC5-202ENST00000336057 SLC1A7O00341 560 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 LATS1O95835 1130 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 GSTM2P28161 218 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 ACSL1P33121 698 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 DOC2AQ14183 400 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 LETMD1Q6P1Q0 360 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 ZBTB8BQ8NAP8 495 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-202ENST00000336057 CSNK1G1Q9HCP0 422 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 PLAGL1Q9UM63 463 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 PRKAB1Q9Y478 270 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 PCDHGB7Q9Y5F8 929 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 BPIP17213 487 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 CDH11P55287 796 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 MINDY4Q4G0A6 757 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 CYP27C1Q4G0S4 372 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 C5orf34Q96MH7 638 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 BOCQ9BWV1 1114 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 CDADC1Q9BWV3 514 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 ANKRD12Q6UB98 2062 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 CAPN5O15484 640 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-202ENST00000336057 FGF18O76093 207 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 TFPIP10646 304 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 ACVR2AP27037 513 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 PITPNAQ00169 270 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 CDKL1Q00532 357 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 ZNF45Q02386 682 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 ZNF805Q5CZA5 627 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 SNAP47Q5SQN1 464 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 PRPF38BQ5VTL8 546 aaKnown RBP15.18■□□□□ 0.02
HDAC5-202ENST00000336057 ZNF517Q6ZMY9 492 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-202ENST00000336057 LGALS12Q96DT0 336 aa15.18■□□□□ 0.02
HDAC5-202ENST00000336057 TRNT1Q96Q11 434 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms