RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SLC5A8Q8N695 610 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 WDR48Q8TAF3 677 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 AP2M1Q96CW1 435 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 SIGLEC11Q96RL6 698 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 NEURL2Q9BR09 285 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 DOHHQ9BU89 302 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 ZSCAN5AQ9BUG6 496 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 TRIM39Q9HCM9 518 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 PALMDQ9NP74 551 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.9□□□□□ -0.342e-14■□□□□ 9.7
TUBA1B-201ENST00000332858 TMEM39AQ9NV64 488 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 BTNL2Q9UIR0 455 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 FBXO9Q9UK97 447 aaPredicted RBP12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 LYVE1Q9Y5Y7 322 aa12.9□□□□□ -0.34
TUBA1B-201ENST00000332858 E9PQ18 207 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 DNAJB5O75953 348 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 AP2A2O94973 939 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 BMP4P12644 408 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 NPPBP16860 134 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 TGFBR2P37173 567 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 LIPAP38571 399 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 NUDT6P53370 316 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 C21orf58P58505 322 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 ERVFC1P60507 584 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 TBPL1P62380 186 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 LIPIQ6XZB0 460 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 C2orf73Q8N5S3 287 aaPredicted RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 DYNC2LI1Q8TCX1 351 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 ALPK1Q96QP1 1244 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 CCM2Q9BSQ5 444 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 TRNAU1APQ9NX07 287 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 OGDHLQ9ULD0 1010 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 HSPE1-MOB4S4R3N1 261 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 KIAA0100Q14667 2235 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 TMEM247A6NEH6 219 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 PLK4O00444 970 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 ATG13O75143 517 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 CATP04040 527 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 TIA1P31483 386 aaKnown RBP eCLIP12.89□□□□□ -0.354e-6■■■□□ 18
TUBA1B-201ENST00000332858 SLC19A1P41440 591 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 PRLHRP49683 370 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 DCDC1P59894 354 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 KCNC4Q03721 635 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 C4orf46Q504U0 113 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 CFAP206Q8IYR0 622 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 MFSD4AQ8N468 514 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 VN1R2Q8NFZ6 395 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.89□□□□□ -0.351e-323■■■■■ 64.5
TUBA1B-201ENST00000332858 TAMM41Q96BW9 452 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 PPP1R14BQ96C90 147 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 LGALS12Q96DT0 336 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 HRASLS5Q96KN8 279 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 PITX2Q99697 317 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 NIPSNAP1Q9BPW8 284 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 SORBS1Q9BX66 1292 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 BRF2Q9HAW0 419 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 PLXND1Q9Y4D7 1925 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 SLC22A1O15245 554 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 GNRH1P01148 92 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 POU2F1P14859 743 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 CD36P16671 472 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 POLR2EP19388 210 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 ST13P50502 369 aaKnown RBP12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 DGKEP52429 567 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 SELENOWP63302 87 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 STARD3Q14849 445 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 COMMD6Q7Z4G1 85 aa12.89□□□□□ -0.35
TUBA1B-201ENST00000332858 OR2A25A4D2G3 310 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 C1orf105O95561 183 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 ELFN1P0C7U0 828 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 LINC00271P0C7V0 271 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 SOWAHCQ53LP3 525 aaPredicted RBP12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 PRSS48Q7RTY5 328 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 VPS37AQ8NEZ2 397 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 ATL1Q8WXF7 558 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 POP5Q969H6 163 aaKnown RBP12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 RAD18Q9NS91 495 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 ADPRHL2Q9NX46 363 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 MAP4K5Q9Y4K4 846 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 PCDHGB3Q9Y5G1 929 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 KCNE2Q9Y6J6 123 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 TNFRSF11BO00300 401 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 FKTNO75072 461 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 TNFRSF21O75509 655 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 SOD1P00441 154 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 XPAP23025 273 aaPredicted RBP12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 ASMTP46597 345 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 CRISP3P54108 245 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 CDH12P55289 794 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 SLBPQ14493 270 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 ZNF846Q147U1 533 aa12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
TUBA1B-201ENST00000332858 PARS2Q7L3T8 475 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms