RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NDUFAF4Q9P032 175 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 TBX21Q9UL17 535 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PLAGL1Q9UM63 463 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SLC5A10A0PJK1 596 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF8P17098 575 aaPredicted RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PPM1AP35813 382 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 CHI3L1P36222 383 aaPredicted RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 TAS2R50P59544 299 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 INAQ16352 499 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 IQCCQ4KMZ1 466 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF805Q5CZA5 627 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PLD3Q8IV08 490 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 CHPT1Q8WUD6 406 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 IL17FQ96PD4 163 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 COPS4Q9BT78 406 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SPNS1Q9H2V7 528 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PAK6Q9NQU5 681 aaPredicted RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 RHCGQ9UBD6 479 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 GULP1Q9UBP9 304 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 RNF6Q9Y252 685 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PCDHGA6Q9Y5G7 932 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SNX8Q9Y5X2 465 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 CCDC88CQ9P219 2028 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SLC22A1O15245 554 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 BCAP31P51572 246 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 GANABQ14697 944 aaKnown RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 DGUOKQ16854 277 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 TSEN54Q7Z6J9 526 aaKnown RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 RNF130Q86XS8 419 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 OR56A3Q8NH54 315 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 APH1BQ8WW43 257 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 LGALS12Q96DT0 336 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PCDHGB1Q9Y5G3 927 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PMF1-BGLAPU3KQ54 211 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 TMEM229AB2RXF0 380 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 NPPBP16860 134 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 CLK1P49759 484 aaKnown RBP16.72■□□□□ 0.27
COL9A1-201ENST00000320755 DNASE1L3Q13609 305 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 SPIN4Q56A73 249 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 FAHD1Q6P587 224 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 PARS2Q7L3T8 475 aaKnown RBP16.72■□□□□ 0.27
COL9A1-201ENST00000320755 TECPR1Q7Z6L1 1165 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 PGBD3Q8N328 593 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 YIPF6Q96EC8 236 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 MRGPRX3Q96LB0 322 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 ZDHHC4Q9NPG8 344 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 RAD18Q9NS91 495 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 CHCHD3Q9NX63 227 aaKnown RBP16.72■□□□□ 0.27
COL9A1-201ENST00000320755 BTNL2Q9UIR0 455 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 WASH3PC4AMC7 463 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 C1orf105O95561 183 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 RHOP08100 348 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 PRLHRP49683 370 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 SELENOWP63302 87 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 MESP2Q0VG99 397 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 PPIGQ13427 754 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL9A1-201ENST00000320755 PROX2Q3B8N5 592 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 PRSS36Q5K4E3 855 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 SYT6Q5T7P8 510 aaPredicted RBP16.72■□□□□ 0.27
COL9A1-201ENST00000320755 GPR155Q7Z3F1 870 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 SVOPQ8N4V2 548 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 OR10G2Q8NGC3 310 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 OR9Q2Q8NGE9 314 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 STARD8Q92502 1023 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 GTPBP3Q969Y2 492 aaKnown RBP16.72■□□□□ 0.27
COL9A1-201ENST00000320755 TBC1D20Q96BZ9 403 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 BRF2Q9HAW0 419 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 POLE4Q9NR33 117 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 RAB23Q9ULC3 237 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 DYRK1BQ9Y463 629 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 LYVE1Q9Y5Y7 322 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 DENND4CQ5VZ89 1909 aa16.72■□□□□ 0.27
COL9A1-201ENST00000320755 SERTM1A2A2V5 107 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 CDH3P22223 829 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 CXCR4P61073 352 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 RELAQ04206 551 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 CD300CQ08708 224 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 SCARB2Q14108 478 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 PPCDCQ96CD2 204 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 ZHX1-C8orf76Q96EF9 292 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 NIPSNAP1Q9BPW8 284 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 CHST8Q9H2A9 424 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 REEP4Q9H6H4 257 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 OGDHLQ9ULD0 1010 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 HSPE1-MOB4S4R3N1 261 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 DNAJB5O75953 348 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 DCDC1P59894 354 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF763Q0D2J5 394 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 SLC5A12Q1EHB4 618 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 EXOC3L2Q2M3D2 409 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 RAET1GQ6H3X3 334 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 ERAP2Q6P179 960 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 NLGN4XQ8N0W4 816 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 VN1R2Q8NFZ6 395 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 TAMM41Q96BW9 452 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 COQ8BQ96D53 544 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF300Q96RE9 604 aaPredicted RBP16.71■□□□□ 0.27
COL9A1-201ENST00000320755 ROGDIQ9GZN7 287 aa16.71■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
COL9A1-201ENST00000320755 MOSPD3O75425 235 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms