RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 DUOXA1Q1HG43 343 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 ZNF689Q96CS4 500 aaPredicted RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 NHSQ6T4R5 1651 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 DLX3O60479 287 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 PSIP1O75475 530 aaKnown RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 CPNE6O95741 557 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 FGL2Q14314 439 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SHISA6Q6ZSJ9 500 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 TRIM8Q9BZR9 551 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 RNF38Q9H0F5 515 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 FARSBQ9NSD9 589 aaKnown RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 COMMD9Q9P000 198 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SH3BGRL2Q9UJC5 107 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 TMED5Q9Y3A6 229 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 FADS3Q9Y5Q0 445 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 E7EQ34 232 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SNPHO15079 494 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 AHSA1O95433 338 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 DCNP07585 359 aaKnown RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 CHRM5P08912 532 aaPredicted RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 UFM1P61960 85 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 PSAPL1Q6NUJ1 521 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 AHSA2Q719I0 299 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 PJA1Q8NG27 643 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 ZBTB20Q9HC78 741 aaPredicted RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 NKIRAS2Q9NYR9 191 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 PCDHGB5Q9Y5G0 923 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 CAPN8A6NHC0 703 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 C1GALT1C1LP0DN25 315 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 RNH1P13489 461 aaKnown RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 CD9P21926 228 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 HERC3Q15034 1050 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 RAB6CQ53S08 254 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 GPR107Q5VW38 600 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 FIGLAQ6QHK4 219 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SHKBP1Q8TBC3 707 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 CAMK1GQ96NX5 476 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 RAB6CQ9H0N0 254 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 CLEC4MQ9H2X3 399 aaPredicted RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 A0A0U1RQS6 177 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SMAD6O43541 496 aaKnown RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 RNF13O43567 381 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 TRIM3O75382 744 aaPredicted RBP13.03□□□□□ -0.32
RFFL-201ENST00000315249 SLC26A3P40879 764 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 FOXK1P85037 733 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 ZNF763Q0D2J5 394 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SCRN3Q0VDG4 424 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 KCNC3Q14003 757 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 TAB1Q15750 504 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 LIN54Q6MZP7 749 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 TRIM73Q86UV7 250 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 CLIP4Q8N3C7 705 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 SLC29A3Q9BZD2 475 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 PPP4R1LQ9P1A2 415 aa13.03□□□□□ -0.32
RFFL-201ENST00000315249 ZNF20P17024 532 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 DPYSQ14117 519 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 MZT2BQ6NZ67 158 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 DNM1P34Q6PK57 102 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 AGAP11Q8TF27 550 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 RIMKLBQ9ULI2 386 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 RP1L1Q8IWN7 2480 aaPredicted RBP13.02□□□□□ -0.32
RFFL-201ENST00000315249 NPIPA2E9PIF3 369 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 NPIPA3F8WFD2 350 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 P04436 131 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 G6PDP11413 515 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 CTBP2P56545 445 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 CLRN1P58418 232 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 ABHD17BQ5VST6 288 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 SPATC1Q76KD6 591 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 GALNT10Q86SR1 603 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 NPWQ8N729 165 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 ZNF611Q8N823 705 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 RAB8BQ92930 207 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 SH3GL3Q99963 347 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.32
RFFL-201ENST00000315249 POLR2J3Q9H1A7 115 aaKnown RBP13.02□□□□□ -0.32
RFFL-201ENST00000315249 BTBD3Q9Y2F9 522 aa13.02□□□□□ -0.32
RFFL-201ENST00000315249 CD38P28907 300 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 SUOXP51687 545 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 GRIN2CQ14957 1233 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 ZDHHC24Q6UX98 284 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 RNF130Q86XS8 419 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 TBC1D17Q9HA65 648 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 ING3Q9NXR8 418 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 OARD1Q9Y530 152 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 IL1RNP18510 177 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
RFFL-201ENST00000315249 SCD5Q86SK9 330 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 THEM6Q8WUY1 208 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 ASB15Q8WXK1 588 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 DUSP23Q9BVJ7 150 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 HEMK1Q9Y5R4 338 aaPredicted RBP13.02□□□□□ -0.33
RFFL-201ENST00000315249 C11orf98E9PRG8 122 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms