RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CCR7P32248 378 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 VHLP40337 213 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 KCNJ5P48544 419 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 IDH2P48735 452 aaKnown RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 DNAJB13P59910 316 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 CLEC1AQ8NC01 280 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 VPS35Q96QK1 796 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 INSM2Q96T92 566 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 ELF4Q99607 663 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 ULBP3Q9BZM4 244 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 P2RX2Q9UBL9 471 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 B4GALT7Q9UBV7 327 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 PRPF19Q9UMS4 504 aaKnown RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 ZNFX1Q9P2E3 1918 aaKnown RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 COL11A1P12107 1806 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 C1orf226A1L170 272 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 METTL12A8MUP2 240 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 CCT3P49368 545 aaKnown RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 NOVA1P51513 510 aaKnown RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 PGGT1BP53609 377 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 EMP2P54851 167 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 CASP9P55211 416 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF789Q5FWF6 425 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 GLYATQ6IB77 296 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 OR52E8Q6IFG1 317 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 NUP54Q7Z3B4 507 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 SETD9Q8NE22 299 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 RELTQ969Z4 430 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 TBC1D10AQ9BXI6 508 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 TM9SF3Q9HD45 589 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 USE1Q9NZ43 259 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 KLHL42Q9P2K6 505 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 DKKL1Q9UK85 242 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 OAS3Q9Y6K5 1087 aaKnown RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 RP1L1Q8IWN7 2480 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 CDC42P60953 191 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 COL9A2Q14055 689 aaPredicted RBP8.9□□□□□ -0.99
PTPRE-202ENST00000306042 PTPRRQ15256 657 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 PCBP2Q15366 365 aaKnown RBP eCLIP8.9□□□□□ -0.99
PTPRE-202ENST00000306042 C14orf28Q4W4Y0 310 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 CEACAM20Q6UY09 585 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 LRRC74BQ6ZQY2 392 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 GALNT12Q8IXK2 581 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 CCDC116Q8IYX3 515 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 OR13J1Q8NGT2 312 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 OR8K5Q8NH50 307 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 OR10A6Q8NH74 314 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 FAM110BQ8TC76 370 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 SLC38A4Q969I6 547 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 PDXPQ96GD0 296 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 MBNL1Q9NR56 388 aaKnown RBP8.9□□□□□ -0.99
PTPRE-202ENST00000306042 TREX1Q9NSU2 369 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 ZDHHC2Q9UIJ5 367 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 NENFQ9UMX5 172 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 POM121BA6NF01 834 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 ARHGEF33A8MVX0 844 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 GABBR2O75899 941 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 RSL1D1O76021 490 aaKnown RBP8.9□□□□□ -0.99
PTPRE-202ENST00000306042 OLFM2O95897 454 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 PVRP15151 417 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 ADRA1AP35348 466 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 MPLP40238 635 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 SHC2P98077 582 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 SPEM2Q0P670 501 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 AFMIDQ63HM1 303 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 TYW3Q6IPR3 259 aaKnown RBP8.9□□□□□ -0.99
PTPRE-202ENST00000306042 SLC22A8Q8TCC7 542 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 THAP11Q96EK4 314 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 SLC47A1Q96FL8 570 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 CNBD2Q96M20 576 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 GRIP2Q9C0E4 1043 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 FGF22Q9HCT0 170 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 SLC40A1Q9NP59 571 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 PRSS21Q9Y6M0 314 aa8.9□□□□□ -0.99
PTPRE-202ENST00000306042 NUMA1Q14980 2115 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 SBF1O95248 1867 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ITM2AO43736 263 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PCDHGA12O60330 932 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 DNAJA2O60884 412 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 RFPL1O75677 317 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 CPNE6O95741 557 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 IFNGP01579 166 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 CXCR1P25024 350 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 CLK1P49759 484 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 DSTNP60981 165 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 LIPEQ05469 1076 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 RUNX1T1Q06455 604 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 LGALS3BPQ08380 585 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 DMTNQ08495 405 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 TAZQ16635 292 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 C3orf38Q5JPI3 329 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 MANEAQ5SRI9 462 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 LAIR1Q6GTX8 287 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 OR4C11Q6IEV9 310 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 LCTLQ6UWM7 567 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PIK3C3Q8NEB9 887 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 HUS1BQ8NHY5 278 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PHOSPHO1Q8TCT1 267 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms