RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 PCDH17O14917 1159 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 TSPAN19P0C672 248 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SRCP12931 536 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 JUNBP17275 347 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 TCEA1P23193 301 aaKnown RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 TARDBPQ13148 414 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 RPS26P11Q5JNZ5 115 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 C10orf62Q5T681 223 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 CAPN13Q6MZZ7 669 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 BCDIN3DQ7Z5W3 292 aaKnown RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 MGLLQ99685 303 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 NIPSNAP1Q9BPW8 284 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 DOHHQ9BU89 302 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 RMI1Q9H9A7 625 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 URB1O60287 2271 aaKnown RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 FADS2P1A8MWK0 482 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 ATG13O75143 517 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 CCNB2O95067 398 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 CD160O95971 181 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SLC10A3P09131 477 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 NR2F1P10589 423 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 PRSS36Q5K4E3 855 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 USP43Q70EL4 1123 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 OLIG3Q7RTU3 272 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 PRSS48Q7RTY5 328 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 TRIM46Q7Z4K8 759 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 ENTHD1Q8IYW4 607 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 IGSF21Q96ID5 467 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 KLF16Q9BXK1 252 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 ZNF334Q9HCZ1 680 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SEC14L3Q9UDX4 400 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 LYVE1Q9Y5Y7 322 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 LEFTY1O75610 366 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 PTHP01270 115 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 INHAP05111 366 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 HMGA1P17096 107 aaKnown RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 RYKP34925 604 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SOX3P41225 446 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 MAGEA8P43361 318 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 IL18R1Q13478 541 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 CLEC12AQ5QGZ9 265 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 CEACAM20Q6UY09 585 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 TCEANCQ8N8B7 351 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 ZNF740Q8NDX6 193 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 OR7G3Q8NG95 312 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 IPCEF1Q8WWN9 437 aaPredicted RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 KAT2AQ92830 837 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SCRN2Q96FV2 425 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 PDLIM5Q96HC4 596 aaKnown RBP16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 CCDC115Q96NT0 180 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 COL21A1Q96P44 957 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SEMA3GQ9NS98 782 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 GIMAP4Q9NUV9 329 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 PMF1-BGLAPU3KQ54 211 aa16.72■□□□□ 0.27
CHRNA5-201ENST00000299565 SLC35F4A4IF30 521 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 ARHGEF33A8MVX0 844 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 GABARAPO95166 117 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 CH25HO95992 272 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 F11P03951 625 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 JUPP14923 745 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 ASMTP46597 345 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 HBA1P69905 142 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 IFITM3Q01628 133 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 RGNQ15493 299 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 PROX2Q3B8N5 592 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 IQCCQ4KMZ1 466 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 PYDC2Q56P42 97 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 ATAD3BQ5T9A4 648 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 STEAP3Q658P3 488 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 DIRAS2Q96HU8 199 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 MAGIXQ9H6Y5 334 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 FAM120CQ9NX05 1096 aaKnown RBP16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 ANGPT4Q9Y264 503 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 BOLA1Q9Y3E2 137 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 INSL5Q9Y5Q6 135 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 CKAP5Q14008 2032 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 HNMTP50135 292 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 OR2B6P58173 313 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 RAB15P59190 212 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 GDPD4Q6W3E5 623 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 MACC1Q6ZN28 852 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 NEIL2Q969S2 332 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 SLC12A9Q9BXP2 914 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 LINC00597Q9H2U6 94 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 WNT6Q9Y6F9 365 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 WWP2O00308 870 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 CYP2A6P11509 494 aaPredicted RBP16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 PSMA1P25786 263 aaKnown RBP16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 CNR2P34972 360 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 SLC15A1P46059 708 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 SPINT3P49223 89 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 LIPKQ5VXJ0 399 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 IQCF1Q8N6M8 205 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 ZFP41Q8N8Y5 198 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 TADA1Q96BN2 335 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 TRNT1Q96Q11 434 aaKnown RBP16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 OR5M11Q96RB7 305 aa16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 GFM1Q96RP9 751 aaKnown RBP16.71■□□□□ 0.27
CHRNA5-201ENST00000299565 DOK1Q99704 481 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms