RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ZBTB20Q9HC78 741 aaPredicted RBP13.09□□□□□ -0.31
BCCIP-202ENST00000299130 TRIM39Q9HCM9 518 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 INIPQ9NRY2 104 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 RAD18Q9NS91 495 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 PADI2Q9Y2J8 665 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 PDE4DIPQ5VU43 2346 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 ATP6V1G1O75348 118 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 TGFB1P01137 390 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 CATP04040 527 aaKnown RBP13.08□□□□□ -0.31
BCCIP-202ENST00000299130 HSD3B1P14060 373 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 PCSK2P16519 638 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 HSD3B2P26439 372 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 ASMTP46597 345 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 RXRGP48443 463 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 PPIGQ13427 754 aaKnown RBP eCLIP13.08□□□□□ -0.318e-7■□□□□ 10.5
BCCIP-202ENST00000299130 TEAD2Q15562 447 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 PAGE2Q7Z2X7 111 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 TRIM73Q86UV7 250 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 MMP21Q8N119 569 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 ZBTB8BQ8NAP8 495 aaPredicted RBP13.08□□□□□ -0.31
BCCIP-202ENST00000299130 C11orf65Q8NCR3 313 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 ZNF480Q8WV37 535 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 IRF7Q92985 503 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 GLYATL1Q969I3 302 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 CCM2Q9BSQ5 444 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 COPS4Q9BT78 406 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 OR51B5Q9H339 312 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 POLE4Q9NR33 117 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 FBXO8Q9NRD0 319 aa13.08□□□□□ -0.31
BCCIP-202ENST00000299130 PCM1Q15154 2024 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 CXorf51AA0A1B0GTR3 108 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 KPNA4O00629 521 aaPredicted RBP13.08□□□□□ -0.32
BCCIP-202ENST00000299130 ATG13O75143 517 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 TNFRSF21O75509 655 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 GRK5P34947 590 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 PRLHRP49683 370 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 CDH12P55289 794 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 UBE2UQ5VVX9 321 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 KREMEN2Q8NCW0 462 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 VPS37AQ8NEZ2 397 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 OR4C15Q8NGM1 316 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.08□□□□□ -0.325e-7■■□□□ 12.8
BCCIP-202ENST00000299130 ATL1Q8WXF7 558 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 GGHQ92820 318 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 FAM210AQ96ND0 272 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 SLC35A5Q9BS91 424 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 ZSCAN5AQ9BUG6 496 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 WRAP53Q9BUR4 548 aaKnown RBP13.08□□□□□ -0.32
BCCIP-202ENST00000299130 CCNB1IP1Q9NPC3 277 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 ASAH2Q9NR71 780 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 OSGIN1Q9UJX0 560 aa13.08□□□□□ -0.32
BCCIP-202ENST00000299130 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 DPM1O60762 260 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 MOSPD3O75425 235 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 FGF18O76093 207 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 POU2F1P14859 743 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 NPPBP16860 134 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 GGT2P36268 569 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 CRISP3P54108 245 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 TBPL1P62380 186 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 EXOC3L2Q2M3D2 409 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 SOWAHCQ53LP3 525 aaPredicted RBP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 SPIN4Q56A73 249 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 ANXA8L1Q5VT79 327 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 MED27Q6P2C8 311 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 COMMD6Q7Z4G1 85 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 KLHDC8AQ8IYD2 350 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 OR10G2Q8NGC3 310 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 OR9Q2Q8NGE9 314 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 PHF10Q8WUB8 498 aaKnown RBP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 ZNF296Q8WUU4 475 aaPredicted RBP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 IPCEF1Q8WWN9 437 aaPredicted RBP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 S100ZQ8WXG8 99 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 FAM83CQ9BQN1 747 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 RNF167Q9H6Y7 350 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 SPHK2Q9NRA0 654 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 ZNF226Q9NYT6 803 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 PSORS1C1Q9UIG5 152 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 PCDHGA2Q9Y5H1 932 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 WNT6Q9Y6F9 365 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 C1orf105O95561 183 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 CXCL14O95715 111 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 SYN1P17600 705 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 TGM1P22735 817 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 GADD45AP24522 165 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 ITGB8P26012 769 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 SPIBQ01892 262 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 PCDH1Q08174 1060 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 SLBPQ14493 270 aaKnown RBP eCLIP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 MAPK11Q15759 364 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 ZNF284Q2VY69 593 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 ZNF658BQ4V348 819 aaPredicted RBP13.07□□□□□ -0.32
BCCIP-202ENST00000299130 LIPIQ6XZB0 460 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 DSG4Q86SJ6 1040 aa13.07□□□□□ -0.32
BCCIP-202ENST00000299130 P3H2Q8IVL5 708 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms