RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 NPPBP16860 134 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 PPIBP23284 216 aaKnown RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 HOXA9P31269 272 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 VIPR2P41587 438 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 CRYBA2P53672 197 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 PNLIPRP1P54315 467 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 MC1RQ01726 317 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 VEZF1Q14119 521 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 RGNQ15493 299 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 LEXMQ3ZCV2 418 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 COX20Q5RI15 118 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 KLHL35Q6PF15 583 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 COMMD6Q7Z4G1 85 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 CAMKMTQ7Z624 323 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 NAGSQ8N159 534 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 TTC29Q8NA56 475 aaPredicted RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 OR9A1PQ8NGU1 263 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 RAB2BQ8WUD1 216 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 COQ8BQ96D53 544 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 SPATA9Q9BWV2 254 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 SPNS1Q9H2V7 528 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 OR51B5Q9H339 312 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 DMRT3Q9NQL9 472 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 KRT84Q9NSB2 600 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 SIRT5Q9NXA8 310 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 THUMPD1Q9NXG2 353 aaKnown RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ERVK-18Q9QC07 812 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ACSL6Q9UKU0 697 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 CORO2BQ9UQ03 480 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 SUV39H1O43463 412 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 LZTS3O60299 673 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 C6orf47O95873 294 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 BCL10O95999 233 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ADH1CP00326 375 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 OPN1SWP03999 348 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 HNRNPA1P09651 372 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 C1GALT1C1LP0DN25 315 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 PCMT1P22061 227 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ITGB7P26010 798 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 PCGF2P35227 344 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 CRATP43155 626 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 IER5LQ5T953 404 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ARMCX6Q7L4S7 300 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 SFTPA1Q8IWL2 248 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 CELF5Q8N6W0 485 aaKnown RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 FAM81AQ8TBF8 368 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 CIDECQ96AQ7 238 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 FUNDC2Q9BWH2 189 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 REEP4Q9H6H4 257 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ADPRHL2Q9NX46 363 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF282Q9UDV7 671 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 PLAGL1Q9UM63 463 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 MAPRE3Q9UPY8 281 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 KIF26AQ9ULI4 1882 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 RNASET2O00584 256 aaKnown RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF197O14709 1029 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 AXIN1O15169 862 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 HOXC11O43248 304 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 CCDC159P0C7I6 412 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ETFAP13804 333 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 HTR1BP28222 390 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 KCNJ10P78508 379 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 KEAP1Q14145 624 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 NFE2L1Q14494 772 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ANKDD1AQ495B1 522 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 C2orf73Q8N5S3 287 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 FBXO15Q8NCQ5 510 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 SLC5A11Q8WWX8 675 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 OR8D1Q8WZ84 308 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF566Q969W8 418 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF707Q96C28 371 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 IL17FQ96PD4 163 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 SGPP1Q9BX95 441 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 BHLHE41Q9C0J9 482 aaPredicted RBP12.38□□□□□ -0.43
CPSF6-201ENST00000266679 EPHX3Q9H6B9 360 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 ATP6V1HQ9UI12 483 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 NAALAD2Q9Y3Q0 740 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 PRKAB1Q9Y478 270 aa12.38□□□□□ -0.43
CPSF6-201ENST00000266679 PLXND1Q9Y4D7 1925 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SOBPA7XYQ1 873 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 MAGEB3O15480 346 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ZBTB11O95625 1053 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 C9P02748 559 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ITIH1P19827 911 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 TNFRSF1BP20333 461 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 EPHA2P29317 976 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 MAP2K4P45985 399 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 HBA1P69905 142 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 C2orf80Q0P641 193 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ELP6Q0PNE2 266 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 E2F2Q14209 437 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SPCS2Q15005 226 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 HIST2H2ACQ16777 129 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 PAGE2BQ5JRK9 111 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 C9orf64Q5T6V5 341 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 HIST2H2AA3Q6FI13 130 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 281.3 ms