RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 PCDHGA2Q9Y5H1 932 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 RNASET2O00584 256 aaKnown RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 ZNF8P17098 575 aaPredicted RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 IMPA1P29218 277 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 LIPAP38571 399 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 SLC19A1P41440 591 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 SELENOWP63302 87 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 IL1RL1Q01638 556 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 NAE1Q13564 534 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 PAGE2BQ5JRK9 111 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 CATSPEREQ5SY80 951 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 ZNF648Q5T619 568 aaPredicted RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 CPTPQ5TA50 214 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 ANXA8L1Q5VT79 327 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 CCDC81Q6ZN84 652 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 SLCO4C1Q6ZQN7 724 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 Q6ZVL8 140 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 Q6ZVU0 165 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TECPR1Q7Z6L1 1165 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 KIAA0907Q7Z7F0 614 aaPredicted RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 TMEM25Q86YD3 366 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TRAM1L1Q8N609 369 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 ATL1Q8WXF7 558 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 FCGR1BQ92637 280 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 FOXJ1Q92949 421 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 MAL2Q969L2 176 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TIFAQ96CG3 184 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 WDR34Q96EX3 536 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 SAMD11Q96NU1 681 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 RASSF1Q9NS23 344 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 DAPK2Q9UIK4 370 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 CORO2BQ9UQ03 480 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 VCANP13611 3396 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TRAV19A0A0A6YYK7 116 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 PABPN1LA6NDY0 278 aaKnown RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 SUV39H1O43463 412 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 BNIP3LO60238 219 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 ATP6V1G1O75348 118 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 ANXA4P09525 319 aaPredicted RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 TIMP2P16035 220 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 CD36P16671 472 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 RRM2P31350 389 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 TGFBR1P36897 503 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 CTSCP53634 463 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 POLR2LP62875 67 aaKnown RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 PDE7AQ13946 482 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 DGCR6Q14129 220 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 ELOAQ14241 798 aaKnown RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 TBCEQ15813 527 aaPredicted RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 AGAP7PQ5VUJ5 663 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 LILRA6Q6PI73 481 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 BRAT1Q6PJG6 821 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 ZNF852Q6ZMS4 543 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 Q6ZPB1 254 aaPredicted RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 AHSA2Q719I0 299 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 CCDC80Q76M96 950 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 ADIPOR2Q86V24 386 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 SNX29P2Q8IUI4 249 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 CCDC103Q8IW40 242 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 DNAJC22Q8N4W6 341 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 LILRA3Q8N6C8 439 aaPredicted RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 RASGEF1AQ8N9B8 481 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 HUS1BQ8NHY5 278 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 CXorf40BQ96DE9 158 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 PKP4Q99569 1192 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 ITPAQ9BY32 194 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 NXF2Q9GZY0 626 aaKnown RBP11.96□□□□□ -0.49
BEST3-201ENST00000266661 SLC28A3Q9HAS3 691 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 SGK2Q9HBY8 427 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 ADPRHL2Q9NX46 363 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 SPG21Q9NZD8 308 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 MSRAQ9UJ68 235 aa11.96□□□□□ -0.49
BEST3-201ENST00000266661 A0A1W2PPC1 479 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 TMEM247A6NEH6 219 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 A8MVJ9 347 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 MYO1DO94832 1006 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 VIPP01282 170 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 NTRK1P04629 796 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 GJA1P17302 382 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 TIA1P31483 386 aaKnown RBP eCLIP11.95□□□□□ -0.5
BEST3-201ENST00000266661 EIF2DP41214 584 aaKnown RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 LIMS1P48059 325 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 SERPINB10P48595 397 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 LRRC74AQ0VAA2 488 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 IRF3Q14653 427 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 TEAD4Q15561 434 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 MPEG1Q2M385 716 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 INAVAQ3KP66 663 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 SPIN4Q56A73 249 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 COX20Q5RI15 118 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 PERM1Q5SV97 790 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.95□□□□□ -0.5
BEST3-201ENST00000266661 TMEM215Q68D42 235 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 SLC46A3Q7Z3Q1 461 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 NLRP8Q86W28 1048 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 LACC1Q8IV20 430 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 CADM3Q8N126 398 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 SLC5A8Q8N695 610 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms