RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 CADM4Q8NFZ8 388 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 FAM110BQ8TC76 370 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 SLC37A2Q8TED4 501 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 CANT1Q8WVQ1 401 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 COQ8BQ96D53 544 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 LRRC61Q9BV99 259 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 MUC13Q9H3R2 512 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 SYNPO2LQ9H987 977 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 LHX9Q9NQ69 397 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 MAPRE3Q9UPY8 281 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 AP4S1Q9Y587 144 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 SPAG17Q6Q759 2223 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 ARHGAP10A1A4S6 786 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 C1QCP02747 245 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 CD38P28907 300 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 C2orf80Q0P641 193 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 TRIP10Q15642 601 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 CCNYL2Q5T2Q4 361 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 HSPA12BQ96MM6 686 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 PRPF18Q99633 342 aaKnown RBP21.36■■□□□ 1.01
SIX3-201ENST00000260653 SH3GL1Q99961 368 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 MACROD1Q9BQ69 325 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 AICDAQ9GZX7 198 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 MIR1-1HGQ9H1L0 117 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 C6orf203Q9P0P8 240 aaPredicted RBP21.36■■□□□ 1.01
SIX3-201ENST00000260653 ATP6V1HQ9UI12 483 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 MUTYHQ9UIF7 546 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 RIMS3Q9UJD0 308 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 SIT1Q9Y3P8 196 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 PCDHB3Q9Y5E6 796 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 EML5Q05BV3 1969 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 A0A1W2PR77 199 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 AQP12BA6NM10 295 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 COQ9O75208 318 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 CLEC3AO75596 197 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 CPSF4O95639 269 aaKnown RBP21.36■■□□□ 1.01
SIX3-201ENST00000260653 IL3P08700 152 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 FURINP09958 794 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 RPS9P46781 194 aaKnown RBP21.36■■□□□ 1.01
SIX3-201ENST00000260653 BLKP51451 505 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 UBE2IP63279 158 aaKnown RBP21.36■■□□□ 1.01
SIX3-201ENST00000260653 SLC14A1Q13336 389 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 ZNF425Q6IV72 752 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 TRIM73Q86UV7 250 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 AQP12AQ8IXF9 295 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 MMP21Q8N119 569 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 DTWD1Q8N5C7 304 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 MFSD2AQ8NA29 543 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 OR2T12Q8NG77 320 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 OR10G6Q8NH81 332 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 FLVCR1-AS1Q8TAF5 88 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 FAM174AQ8TBP5 190 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 PKP2Q99959 881 aa21.36■■□□□ 1.01
SIX3-201ENST00000260653 KAT8Q9H7Z6 458 aaKnown RBP21.36■■□□□ 1.01
SIX3-201ENST00000260653 PPM1DO15297 605 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 TRPC1P48995 793 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 UBE3DQ7Z6J8 389 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 TTLQ8NG68 377 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 DUS3LQ96G46 650 aaKnown RBP21.35■■□□□ 1.01
SIX3-201ENST00000260653 TBCDQ9BTW9 1192 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 RPF2Q9H7B2 306 aaKnown RBP21.35■■□□□ 1.01
SIX3-201ENST00000260653 POT1Q9NUX5 634 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 CACNA1IQ9P0X4 2223 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 LAMA1P25391 3075 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 CEP192Q8TEP8 1941 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 A0A0G2JN53 185 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 BCKDHBP21953 392 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 SLC7A1P30825 629 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 CXCL12P48061 93 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 PDE7AQ13946 482 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 ZNF548Q8NEK5 533 aaPredicted RBP21.35■■□□□ 1.01
SIX3-201ENST00000260653 PCED1AQ9H1Q7 454 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 LRRC42Q9Y546 428 aa21.35■■□□□ 1.01
SIX3-201ENST00000260653 OR6C74A6NCV1 312 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 K7ESF4 209 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 POLR2CP19387 275 aaPredicted RBP21.34■■□□□ 1.01
SIX3-201ENST00000260653 ZNF621Q6ZSS3 439 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 FAM46DQ8NEK8 389 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 DNAJC9Q8WXX5 260 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 RGMAQ96B86 450 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 CCDC115Q96NT0 180 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 OR2A14Q96R47 310 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 SPASTQ9UBP0 616 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 MUC3AQ02505 3323 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 KIR2DS5A0A0G2JLQ3 304 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 A0A0G2JNG1 304 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 DHRS12A0PJE2 317 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 LRIT2A6NDA9 550 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 KIR2DS3K7RE56 304 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 CASQ2O14958 399 aaPredicted RBP21.34■■□□□ 1.01
SIX3-201ENST00000260653 HNRNPFP52597 415 aaKnown RBP21.34■■□□□ 1.01
SIX3-201ENST00000260653 MAPK12P53778 367 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 PLA2G16P53816 162 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 RACK1P63244 317 aaKnown RBP21.34■■□□□ 1.01
SIX3-201ENST00000260653 KIR2DS3Q14952 304 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 KIR2DS5Q14953 304 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 PAGE2Q7Z2X7 111 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 SLC22A18Q96BI1 424 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 PPCDCQ96CD2 204 aa21.34■■□□□ 1.01
SIX3-201ENST00000260653 CENPKQ9BS16 269 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms