RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KCTD7Q96MP8 289 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SOX17Q9H6I2 414 aaPredicted RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 MAFFQ9ULX9 164 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 PCDHGB7Q9Y5F8 929 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 PIK3C2AO00443 1686 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SOX1O00570 391 aaPredicted RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 ITGA5P08648 1049 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 RPP38P78345 283 aaKnown RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 INCA1Q0VD86 236 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 PTGR1Q14914 329 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SPIN3Q5JUX0 258 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 PNPLA1Q8N8W4 532 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 ANKFN1Q8N957 763 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF641Q96N77 438 aaPredicted RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 DUOX1Q9NRD9 1551 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 H3BSA7 217 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CWF19L1Q69YN2 538 aaKnown RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 NOXRED1Q6NXP6 359 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SGCDQ92629 289 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 VNN3Q9NY84 501 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CCDC59Q9P031 241 aaKnown RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CYTH4Q9UIA0 394 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 NOX1Q9Y5S8 564 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 LCHNA4D1U4 455 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 GATBO75879 557 aaKnown RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC2A2P11168 524 aaPredicted RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 PRKCDQ05655 676 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CCINQ13939 588 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 PLEKHG6Q3KR16 790 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 GAL3ST3Q96A11 431 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CA14Q9ULX7 337 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 ACTL7AQ9Y615 435 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 GPR89AB7ZAQ6 455 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CDC40O60508 579 aaKnown RBP eCLIP18.07■□□□□ 0.483e-6■■■□□ 17.2
SMARCC1-201ENST00000254480 S100A6P06703 90 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 DLDP09622 509 aaKnown RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 GPR89BP0CG08 455 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 PRAMEF17Q5VTA0 474 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SDR16C5Q8N3Y7 309 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 ATXN7L1Q9ULK2 861 aaPredicted RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 FARSAQ9Y285 508 aaKnown RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 DCUN1D3Q8IWE4 304 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 RAB2BQ8WUD1 216 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 TSACCQ96A04 125 aaPredicted RBP18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 SPHK2Q9NRA0 654 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF69Q9UC07 566 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 PLEKHA6Q9Y2H5 1048 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 OR6C74A6NCV1 312 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC9A3P48764 834 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 SMSP52788 366 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 RAB30Q15771 203 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 ITPRIPL2Q3MIP1 535 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC22A8Q8TCC7 542 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 GJD2Q9UKL4 321 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 POFUT2Q9Y2G5 429 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 CDRT1O95170 752 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 PRSS56P0CW18 603 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 OR12D1P0DN82 309 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC10A2Q12908 348 aaPredicted RBP18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 CYBRD1Q53TN4 286 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC30A8Q8IWU4 369 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 EZH1Q92800 747 aaPredicted RBP18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 GPR174Q9BXC1 333 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 AKAP8O43823 692 aaKnown RBP18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 OR7A10O76100 309 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 HEXBP07686 556 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 ARRB1P49407 418 aaPredicted RBP18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF761Q86XN6 746 aaPredicted RBP18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 TGM7Q96PF1 710 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 SLCO3A1Q9UIG8 710 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 ORC5O43913 435 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 PDYNP01213 254 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 HMGN1P05114 100 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 HCKP08631 526 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 TACSTD2P09758 323 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 EBLN1P0CF75 366 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 CAPZA1P52907 286 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 GRB7Q14451 532 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 MR1Q95460 341 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 FBXL8Q96CD0 374 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 WDR45Q9Y484 360 aa18.06■□□□□ 0.48
SMARCC1-201ENST00000254480 A0A1W2PPK0 400 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 A0A1W2PPL8 197 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 MUSKO15146 869 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 COQ9O75208 318 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 ITGA10O75578 1167 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 VIPR2P41587 438 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 KLHDC10Q6PID8 442 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 TCEANCQ8N8B7 351 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 MSLNLQ96KJ4 702 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 MNTQ99583 582 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 DCSTAMPQ9H295 470 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 DKKL1Q9UK85 242 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 SCO2O43819 266 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF806P0C7X5 589 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 PDPRQ8NCN5 879 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 UPB1Q9UBR1 384 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 SERTAD3Q9UJW9 196 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms