RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZBTB20Q9HC78 741 aaPredicted RBP24.55■■□□□ 1.52
RAB40C-201ENST00000248139 SH3GLB1Q9Y371 365 aa24.55■■□□□ 1.52
RAB40C-201ENST00000248139 PRKAB1Q9Y478 270 aa24.55■■□□□ 1.52
RAB40C-201ENST00000248139 LYVE1Q9Y5Y7 322 aa24.55■■□□□ 1.52
RAB40C-201ENST00000248139 KPNA3O00505 521 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-201ENST00000248139 ELFN1P0C7U0 828 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 SYN1P17600 705 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 ZNF697Q5TEC3 545 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 NEK10Q6ZWH5 1172 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 COMMD6Q7Z4G1 85 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 TAMM41Q96BW9 452 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 TCF25Q9BQ70 676 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 CCM2Q9BSQ5 444 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 RNF167Q9H6Y7 350 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 HMG20AQ9NP66 347 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 TDP1Q9NUW8 608 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 RHCGQ9UBD6 479 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 KCNE2Q9Y6J6 123 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 H3BM21 787 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 SLC22A1O15245 554 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 WDR5P61964 334 aaKnown RBP24.54■■□□□ 1.52
RAB40C-201ENST00000248139 CYP4F2P78329 520 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 P3H2Q8IVL5 708 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 C11orf65Q8NCR3 313 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 OR56A3Q8NH54 315 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 ING5Q8WYH8 240 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 IL17FQ96PD4 163 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 SLC35A5Q9BS91 424 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 COPS4Q9BT78 406 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 ZSCAN5AQ9BUG6 496 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 ACAT2Q9BWD1 397 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 SPASTQ9UBP0 616 aa24.54■■□□□ 1.52
RAB40C-201ENST00000248139 NPPBP16860 134 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 TGFBR2P37173 567 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 CXCR4P61073 352 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 SPIBQ01892 262 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 GANABQ14697 944 aaKnown RBP24.53■■□□□ 1.52
RAB40C-201ENST00000248139 PROX2Q3B8N5 592 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 LIPIQ6XZB0 460 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 TECPR1Q7Z6L1 1165 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 KLHL23Q8NBE8 558 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 UTP15Q8TED0 518 aaKnown RBP24.53■■□□□ 1.52
RAB40C-201ENST00000248139 PALMDQ9NP74 551 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 PLAGL1Q9UM63 463 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 RANBP2P49792 3224 aaKnown RBP24.53■■□□□ 1.52
RAB40C-201ENST00000248139 MOSPD3O75425 235 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 AP2A2O94973 939 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 CDH3P22223 829 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 CRISP3P54108 245 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 ERVFC1P60507 584 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 SELENOWP63302 87 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 PPIGQ13427 754 aaKnown RBP eCLIP24.53■■□□□ 1.52
RAB40C-201ENST00000248139 KCNC3Q14003 757 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 MED27Q6P2C8 311 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 TRAPPC5Q8IUR0 188 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 VN1R2Q8NFZ6 395 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 COQ8BQ96D53 544 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 OR2AG1Q9H205 316 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.53■■□□□ 1.52
RAB40C-201ENST00000248139 BTNL2Q9UIR0 455 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 PCDHGB3Q9Y5G1 929 aa24.53■■□□□ 1.52
RAB40C-201ENST00000248139 OR2A25A4D2G3 310 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 WASH3PC4AMC7 463 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 ZSCAN9O15535 394 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-201ENST00000248139 PRSS48Q7RTY5 328 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 MFSD4AQ8N468 514 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 ATL1Q8WXF7 558 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 PPP1R14BQ96C90 147 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 GPR83Q9NYM4 423 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 TAS2R16Q9NYV7 291 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 IL36AQ9UHA7 158 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 NOTCH4Q99466 2003 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 KRBA1A5PL33 1030 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 DNAJB5O75953 348 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 C1orf105O95561 183 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 KLK1P06870 262 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 RXRGP48443 463 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 CD97P48960 835 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 C2orf80Q0P641 193 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 DGUOKQ16854 277 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 EXOC3L2Q2M3D2 409 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 PARS2Q7L3T8 475 aaKnown RBP24.52■■□□□ 1.52
RAB40C-201ENST00000248139 RNF130Q86XS8 419 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 TBX21Q9UL17 535 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 HSPE1-MOB4S4R3N1 261 aa24.52■■□□□ 1.52
RAB40C-201ENST00000248139 ADAM23O75077 832 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 ASMTP46597 345 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 PRLHRP49683 370 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 TAS2R50P59544 299 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 OR10G2Q8NGC3 310 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 GTPBP3Q969Y2 492 aaKnown RBP24.51■■□□□ 1.51
RAB40C-201ENST00000248139 HRASLS5Q96KN8 279 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 BRF2Q9HAW0 419 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 ZDHHC4Q9NPG8 344 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 NECTIN3Q9NQS3 549 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 PAK6Q9NQU5 681 aaPredicted RBP24.51■■□□□ 1.51
RAB40C-201ENST00000248139 EFCAB9A8MZ26 197 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 KLHL18O94889 574 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 PCGF2P35227 344 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 SOAT1P35610 550 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms