RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 AMER2Q8N7J2 671 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 WDR48Q8TAF3 677 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 RAB8BQ92930 207 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 IRF7Q92985 503 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 GLYATL1Q969I3 302 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 PPP1R14BQ96C90 147 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 OTUB1Q96FW1 271 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 CNDP2Q96KP4 475 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 DYRK4Q9NR20 520 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 TMCC3Q9ULS5 477 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 RNF6Q9Y252 685 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 CYP7B1O75881 506 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GPX2P18283 190 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 PPIBP23284 216 aaKnown RBP12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 TPTEP56180 551 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ST3GAL4Q11206 333 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 COMMD6Q7Z4G1 85 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ENTHD1Q8IYW4 607 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 CCM2Q9BSQ5 444 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ZSCAN5AQ9BUG6 496 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ALOXE3Q9BYJ1 711 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 OSGEPL1Q9H4B0 414 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 RNF167Q9H6Y7 350 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 CORO2BQ9UQ03 480 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 KCNE1BA0A087WTH5 132 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 A0A1W2PRB8 838 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 TTC36A6NLP5 189 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 FAM227AF5H4B4 570 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 NRG2O14511 850 aaPredicted RBP12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 OR10H3O60404 316 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GADD45GO95257 159 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GSTM1P09488 218 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 PCMT1P22061 227 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 FUT4P22083 530 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 IMPA1P29218 277 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 PTPN6P29350 595 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GPC1P35052 558 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ITGA1P56199 1179 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GSTM4Q03013 218 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 KEAP1Q14145 624 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 TEAD4Q15561 434 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GGTA1PQ4G0N0 100 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ARMCX4Q5H9R4 360 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 DSG4Q86SJ6 1040 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 OR8H2Q8N162 312 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC43A3Q8NBI5 491 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 PXYLP1Q8TE99 480 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 EXOSC8Q96B26 276 aaKnown RBP12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 REPS1Q96D71 796 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ALPK1Q96QP1 1244 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 NLNQ9BYT8 704 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 NUAK2Q9H093 628 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 TDP1Q9NUW8 608 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ERVK-11Q9UQG0 969 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 HS3ST2Q9Y278 367 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 MICAL3Q7RTP6 2002 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 SCAMP1O15126 338 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 JRKO75564 520 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GABARAPO95166 117 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 DNTTP04053 509 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 PCYT1AP49585 367 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 PTPN5P54829 565 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 WNT3P56703 355 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 CDC42P60953 191 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF763Q0D2J5 394 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 METTL2BQ6P1Q9 378 aaKnown RBP12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 GALNT13Q8IUC8 556 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 CHPFQ8IZ52 775 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 CACTIN-AS1Q8N1I8 211 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 Q96MT0 163 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 SAMD11Q96NU1 681 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 OR4K3Q96R72 315 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 KCNS3Q9BQ31 491 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 STOML2Q9UJZ1 356 aa12.12□□□□□ -0.47
RAB3IP-201ENST00000247833 TRBC2A0A5B9 178 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 SYNDIG1LA6NDD5 238 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 GFYI3L273 518 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 GREM1O60565 184 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 CSF2RAP15509 400 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 LIPAP38571 399 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 CSNK1DP48730 415 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 GZMMP51124 257 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 MVKQ03426 396 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 FNDC3BQ53EP0 1204 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 SPIN4Q56A73 249 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 PRSS48Q7RTY5 328 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 MMP21Q8N119 569 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 AQP11Q8NBQ7 271 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 BTN2A2Q8WVV5 523 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 FAM210AQ96ND0 272 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 NIPSNAP1Q9BPW8 284 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 PALMDQ9NP74 551 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 MS4A12Q9NXJ0 267 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms