RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 KCTD3Q9Y597 815 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 PIK3C2AO00443 1686 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 A0A1W2PP18 115 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 BPNT1O95861 308 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 RPL26P61254 145 aaKnown RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC39A4Q6P5W5 647 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 C22orf39Q6P5X5 142 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 NCEH1Q6PIU2 408 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 AGTRAPQ6RW13 159 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 OR9A1PQ8NGU1 263 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC35F5Q8WV83 523 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 FBXL20Q96IG2 436 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 OR51I1Q9H343 314 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TREM1Q9NP99 234 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 NLGN3Q9NZ94 848 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 ABCD2Q9UBJ2 740 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 LAMP5Q9UJQ1 280 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 VSTM5A8MXK1 200 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 CLEC3AO75596 197 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 VAMP1P23763 118 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC6A6P31641 620 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 GJA8P48165 433 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TUBA1BP68363 451 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TUBA4AP68366 448 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 RIN1Q13671 783 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF517Q6ZMY9 492 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TUBA1AQ71U36 451 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 RNF130Q86XS8 419 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC44A3Q8N4M1 653 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 NR4A3Q92570 626 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TM9SF3Q9HD45 589 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TDP1Q9NUW8 608 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 NUDT15Q9NV35 164 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TMEM248Q9NWD8 314 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 KLK3P07288 261 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 RPL6Q02878 288 aaKnown RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SFT2D3Q587I9 215 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 RAB12Q6IQ22 244 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TUBA3EQ6PEY2 450 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SYCE2Q6PIF2 218 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TMED4Q7Z7H5 227 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 OSTF1Q92882 214 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 FUZQ9BT04 418 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 CRTAC1Q9NQ79 661 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 NLE1Q9NVX2 485 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TEX13CA0A0J9YWL9 993 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 HTR3EA5X5Y0 456 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TNFRSF10BO14763 440 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 INPPL1O15357 1258 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 STOMP27105 288 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC18A1P54219 525 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 GALNT2Q10471 571 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TUBA3CQ13748 450 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SEC23BQ15437 767 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 EIF2S3LQ2VIR3 472 aaKnown RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 ALG10Q5BKT4 473 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 CTU1Q7Z7A3 348 aaKnown RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC37A3Q8NCC5 494 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 NLGN2Q8NFZ4 835 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 FANK1Q8TC84 345 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 DENND1AQ8TEH3 1009 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 KIAA1191Q96A73 305 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 C1orf21Q9H246 121 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 ACTL8Q9H568 366 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 MINDY3Q9H8M7 445 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 FANCFQ9NPI8 374 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 NOP16Q9Y3C1 178 aaKnown RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 A0A0U1RQF3 1178 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 A0A1B0GVI7 797 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 M0R2N6 131 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 PEX12O00623 359 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 AXIN1O15169 862 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 OAZ2O95190 189 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 AOC1P19801 751 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 MAPK3P27361 379 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 STC1P52823 247 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 RAB15P59190 212 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 EMX2Q04743 252 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 CYBRD1Q53TN4 286 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SSX6Q7RTT6 188 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC22A16Q86VW1 577 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TICAM1Q8IUC6 712 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 MFSD2AQ8NA29 543 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 OR6N1Q8NGY5 312 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 RFT1Q96AA3 541 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TRIM43Q96BQ3 446 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 AURKBQ96GD4 344 aaPredicted RBP11.18□□□□□ -0.62
LAMA4-201ENST00000230538 MKLN1Q9UL63 735 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 PCDHB14Q9Y5E9 798 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 SLC35F4A4IF30 521 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 VNN2O95498 520 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 YES1P07947 543 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 HOXB2P14652 356 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 CCNOP22674 350 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 GGT5P36269 586 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 TAS2R43P59537 309 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 ABHD18Q0P651 414 aa11.18□□□□□ -0.62
LAMA4-201ENST00000230538 MEP1AQ16819 746 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms