RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CPED1A4D0V7 1026 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 H3BSA7 217 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 RORCP51449 518 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 NRG3P56975 720 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 GRM2Q14416 872 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 GRB7Q14451 532 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 SMCO1Q147U7 214 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 TLR1Q15399 786 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 CYBRD1Q53TN4 286 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ANKRD26P1Q6NSI1 321 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 REEP3Q6NUK4 255 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 GRHL3Q8TE85 626 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 SMPDL3BQ92485 455 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 C17orf62Q9BQA9 187 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 DCSTAMPQ9H295 470 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 BACE2Q9Y5Z0 518 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 CITO14578 2027 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 GREB1LQ9C091 1923 aaPredicted RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 A0A075B6Q4 140 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 FAM170BA6NMN3 283 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 B4GALT2O60909 372 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 DBIP07108 87 aaKnown RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 GM2AP17900 193 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 CXCR1P25024 350 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 SLC6A4P31645 630 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 CBX5P45973 191 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 GBX2P52951 348 aaPredicted RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 ARSFP54793 590 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 IDNKQ5T6J7 187 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 SLC22A15Q8IZD6 547 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 KLHL36Q8N4N3 616 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 ZNF676Q8N7Q3 588 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 AQP11Q8NBQ7 271 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 RAB8BQ92930 207 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 TMEM203Q969S6 136 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 RANBP9Q96S59 729 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 WDR45Q9Y484 360 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 ZCWPW2A0A1B0GU75 182 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 ACOX3O15254 700 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 PRMT3O60678 531 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 CFIP05156 583 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 MAGEA3P43357 314 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 TXNL4AP83876 142 aaKnown RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 HYAL2Q12891 473 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 BNIP3Q12983 259 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 RAB30Q15771 203 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 AKIRIN2Q53H80 203 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 RANBP10Q6VN20 620 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 SYVN1Q86TM6 617 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 ZNF527Q8NB42 609 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 PGAP3Q96FM1 320 aaPredicted RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 CRELD1Q96HD1 420 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 KCTD7Q96MP8 289 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 WDR83Q9BRX9 315 aaKnown RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 REEP4Q9H6H4 257 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 TNFRSF10DQ9UBN6 386 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 MBLAC1A4D2B0 266 aaPredicted RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 AREL1O15033 823 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 CAPN5O15484 640 aaPredicted RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 TLX2O43763 284 aaPredicted RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 CLIC3O95833 236 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 CH25HO95992 272 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 SLC10A3P09131 477 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 GMPRP36959 345 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 TSPAN5P62079 268 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 VLDLRP98155 873 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 KCNC4Q03721 635 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 CTC1Q2NKJ3 1217 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 MARCH8Q5T0T0 291 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 LIPJQ5W064 366 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 ZNF296Q8WUU4 475 aaPredicted RBP11.12□□□□□ -0.63
NOD1-201ENST00000222823 RIT1Q92963 219 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 TM9SF3Q9HD45 589 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 HCN4Q9Y3Q4 1203 aa11.12□□□□□ -0.63
NOD1-201ENST00000222823 GLOD5A6NK44 160 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 K7ERQ8 282 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 ORC5O43913 435 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 COQ9O75208 318 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 SERPINA3P01011 423 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 ZNF534Q76KX8 674 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 LRRTM3Q86VH5 581 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 RNF130Q86XS8 419 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 TMEM126BQ8IUX1 230 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 KCNH6Q9H252 994 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 ALKBH4Q9NXW9 302 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 HTRA2O43464 458 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 DFNA5O60443 496 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 LINGO3P0C6S8 592 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 C1GALT1C1LP0DN25 315 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 BCKDHAP12694 445 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 TYRP1P17643 537 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 MLLT3P42568 568 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 ELAVL3Q14576 367 aaKnown RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
NOD1-201ENST00000222823 PM20D1Q6GTS8 502 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 RAB7BQ96AH8 199 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 SLC45A3Q96JT2 553 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms