RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH1	YKL148C	TAD1	P53065	400 aa		13.15	□□□□□ -0.3
SDH1	YKL148C	VTI1	Q04338	217 aa		13.15	□□□□□ -0.3
SDH1	YKL148C	SKG3	Q06315	1026 aa		13.15	□□□□□ -0.3
SDH1	YKL148C	KIC1	P38692	1080 aa		13.14	□□□□□ -0.31
SDH1	YKL148C	VPS45	P38932	577 aa		13.14	□□□□□ -0.31
SDH1	YKL148C	GAS5	Q08193	484 aa		13.14	□□□□□ -0.31
SDH1	YKL148C	RPL8A	P17076	256 aa	Known RBP	13.13	□□□□□ -0.31
SDH1	YKL148C	YGR273C	P53329	174 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	ACK1	Q07622	623 aa	Predicted RBP	13.13	□□□□□ -0.31
SDH1	YKL148C	TUS1	Q06412	1307 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	RAM2	P29703	316 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	JNM1	P36224	373 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	TDA3	P38758	523 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	BIM1	P40013	344 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	MSN5	P52918	1224 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	YPR078C	Q06813	372 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	SIL1	Q08199	421 aa		13.13	□□□□□ -0.31
SDH1	YKL148C	SMC1	P32908	1225 aa		13.12	□□□□□ -0.31
SDH1	YKL148C	NIP100	P33420	868 aa		13.12	□□□□□ -0.31
SDH1	YKL148C	GAA1	P39012	614 aa		13.12	□□□□□ -0.31
SDH1	YKL148C	BTN2	P53286	410 aa		13.12	□□□□□ -0.31
SDH1	YKL148C	BUL2	Q03758	920 aa	Known RBP	13.12	□□□□□ -0.31
SDH1	YKL148C	URH1	Q04179	340 aa		13.12	□□□□□ -0.31
SDH1	YKL148C	STE23	Q06010	1027 aa		13.12	□□□□□ -0.31
SDH1	YKL148C	GSC2	P40989	1895 aa		13.12	□□□□□ -0.31
SDH1	YKL148C	SRO9	P25567	434 aa	Known RBP	13.11	□□□□□ -0.31
SDH1	YKL148C	SEC20	P28791	383 aa		13.11	□□□□□ -0.31
SDH1	YKL148C	GUP1	P53154	560 aa		13.11	□□□□□ -0.31
SDH1	YKL148C	PCL8	Q08966	492 aa		13.11	□□□□□ -0.31
SDH1	YKL148C	GCG1	P32656	232 aa	Known RBP	13.11	□□□□□ -0.31
SDH1	YKL148C	YKU70	P32807	602 aa		13.11	□□□□□ -0.31
SDH1	YKL148C	UBP5	P39944	805 aa		13.11	□□□□□ -0.31
SDH1	YKL148C	ROG3	P43602	733 aa		13.11	□□□□□ -0.31
SDH1	YKL148C	TOF1	P53840	1238 aa		13.11	□□□□□ -0.31
SDH1	YKL148C	OLA1	P38219	394 aa	Known RBP	13.1	□□□□□ -0.31
SDH1	YKL148C	MMM1	P41800	426 aa		13.1	□□□□□ -0.31
SDH1	YKL148C	MLH2	Q07980	695 aa		13.1	□□□□□ -0.31
SDH1	YKL148C	TCO89	Q08921	799 aa		13.1	□□□□□ -0.31
SDH1	YKL148C	GRX6	Q12438	231 aa		13.1	□□□□□ -0.31
SDH1	YKL148C	LAS1	P36146	502 aa	Predicted RBP	13.09	□□□□□ -0.31
SDH1	YKL148C	DSN1	P40568	576 aa		13.09	□□□□□ -0.31
SDH1	YKL148C	MFM1	Q02783	413 aa		13.09	□□□□□ -0.31
SDH1	YKL148C	SUE1	Q06524	206 aa		13.09	□□□□□ -0.31
SDH1	YKL148C	APL5	Q08951	932 aa	Known RBP	13.09	□□□□□ -0.31
SDH1	YKL148C	SAM2	P19358	384 aa	Known RBP	13.09	□□□□□ -0.31
SDH1	YKL148C	UBP9	P39967	754 aa		13.09	□□□□□ -0.31
SDH1	YKL148C	LSB1	P53281	241 aa		13.09	□□□□□ -0.31
SDH1	YKL148C	SIP3	P38717	1229 aa		13.08	□□□□□ -0.32
SDH1	YKL148C	PIH1	P38768	344 aa		13.08	□□□□□ -0.32
SDH1	YKL148C	NUP82	P40368	713 aa		13.08	□□□□□ -0.32
SDH1	YKL148C	SGM1	P47166	707 aa		13.08	□□□□□ -0.32
SDH1	YKL148C	YPL225W	Q08971	146 aa	Known RBP	13.08	□□□□□ -0.32
SDH1	YKL148C	FLO11	P08640	1367 aa		13.08	□□□□□ -0.32
SDH1	YKL148C	ILV1	P00927	576 aa	Known RBP	13.07	□□□□□ -0.32
SDH1	YKL148C	ERG11	P10614	530 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	MCD4	P36051	919 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	SPP381	P38282	291 aa	Predicted RBP	13.07	□□□□□ -0.32
SDH1	YKL148C	YFL034W	P43564	1073 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	NBP1	P52919	319 aa	Predicted RBP	13.07	□□□□□ -0.32
SDH1	YKL148C	KAP114	P53067	1004 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	PGA2	P53903	129 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	YDL124W	Q07551	312 aa	Known RBP	13.07	□□□□□ -0.32
SDH1	YKL148C	OXR1	Q08952	273 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	PFK1	P16861	987 aa	Known RBP	13.07	□□□□□ -0.32
SDH1	YKL148C	PWP2	P25635	923 aa	Known RBP	13.07	□□□□□ -0.32
SDH1	YKL148C	ISW1	P38144	1129 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	ZRT2	Q12436	422 aa		13.07	□□□□□ -0.32
SDH1	YKL148C	TRK2	P28584	889 aa		13.06	□□□□□ -0.32
SDH1	YKL148C	PXA1	P41909	870 aa		13.06	□□□□□ -0.32
SDH1	YKL148C	TRS85	P46944	698 aa		13.06	□□□□□ -0.32
SDH1	YKL148C	SEC5	P89102	971 aa		13.06	□□□□□ -0.32
SDH1	YKL148C	YDL057W	Q07379	328 aa		13.06	□□□□□ -0.32
SDH1	YKL148C	RRG1	Q12167	365 aa	Predicted RBP	13.06	□□□□□ -0.32
SDH1	YKL148C	MED1	Q12321	566 aa		13.06	□□□□□ -0.32
SDH1	YKL148C	DAL7	P21826	554 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	SEC8	P32855	1065 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	KTR2	P33550	425 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	SUL1	P38359	859 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	DIG1	Q03063	452 aa	Known RBP	13.05	□□□□□ -0.32
SDH1	YKL148C	FUS2	Q05670	677 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	SDH5	Q08230	162 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	RPC17	P47076	161 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	YGR021W	P53212	290 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	UTP14	Q04500	899 aa	Known RBP	13.05	□□□□□ -0.32
SDH1	YKL148C	ECI1	Q05871	280 aa		13.05	□□□□□ -0.32
SDH1	YKL148C	TSR1	Q07381	788 aa	Known RBP	13.05	□□□□□ -0.32
SDH1	YKL148C	FKS1	P38631	1876 aa	Known RBP	13.04	□□□□□ -0.32
SDH1	YKL148C	UBC6	P33296	250 aa	Predicted RBP	13.04	□□□□□ -0.32
SDH1	YKL148C	PAN5	P38787	379 aa		13.04	□□□□□ -0.32
SDH1	YKL148C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.03	□□□□□ -0.32	not detected
SDH1	YKL148C	GIR2	Q03768	265 aa	Predicted RBP	13.03	□□□□□ -0.32
SDH1	YKL148C	UTP4	Q06679	776 aa	Known RBP	13.03	□□□□□ -0.32
SDH1	YKL148C	RIO1	Q12196	484 aa	Known RBP	13.03	□□□□□ -0.32
SDH1	YKL148C	MRF1	P30775	413 aa	Predicted RBP	13.03	□□□□□ -0.32
SDH1	YKL148C	CST26	P38226	397 aa		13.03	□□□□□ -0.32
SDH1	YKL148C	SDS3	P40505	327 aa		13.03	□□□□□ -0.32
SDH1	YKL148C	FAL1	Q12099	399 aa	Known RBP	13.03	□□□□□ -0.32
SDH1	YKL148C	ERT1	P38140	529 aa		13.02	□□□□□ -0.32
SDH1	YKL148C	TRP2	P00899	507 aa	Known RBP	13.01	□□□□□ -0.33
SDH1	YKL148C	ARG4	P04076	463 aa	Predicted RBP	13.01	□□□□□ -0.33

Retrieved 100 of 5,963 RNA–protein pairs in 104.2 ms