RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C THS1P04801 734 aaKnown RBP2.72□□□□□ -1.97
VPS54YDR027C PEP7P32609 515 aa2.72□□□□□ -1.97
VPS54YDR027C UGA2P38067 497 aa2.72□□□□□ -1.97
VPS54YDR027C ACM1Q08981 209 aa2.72□□□□□ -1.97
VPS54YDR027C GNT1Q12096 491 aa2.72□□□□□ -1.97
VPS54YDR027C PMA1P05030 918 aaKnown RBP2.72□□□□□ -1.97
VPS54YDR027C ACE2P21192 770 aa2.72□□□□□ -1.97
VPS54YDR027C MCM2P29469 868 aa2.72□□□□□ -1.97
VPS54YDR027C MXR1P40029 184 aa2.72□□□□□ -1.97
VPS54YDR027C RRT14P40470 206 aa2.72□□□□□ -1.97
VPS54YDR027C CTF4Q01454 927 aa2.72□□□□□ -1.97
VPS54YDR027C BI4P03879 638 aa2.71□□□□□ -1.98
VPS54YDR027C POA1P38218 177 aa2.71□□□□□ -1.98
VPS54YDR027C GEM1P39722 662 aa2.71□□□□□ -1.98
VPS54YDR027C SLI1P53304 468 aa2.71□□□□□ -1.98
VPS54YDR027C RPP2AP05319 106 aaKnown RBP2.71□□□□□ -1.98
VPS54YDR027C RPL11AP0C0W9 174 aaKnown RBP2.71□□□□□ -1.98
VPS54YDR027C RER2P35196 286 aa2.71□□□□□ -1.98
VPS54YDR027C PLB1P39105 664 aa2.71□□□□□ -1.98
VPS54YDR027C MND2P40577 368 aa2.71□□□□□ -1.98
VPS54YDR027C POL32P47110 350 aa2.71□□□□□ -1.98
VPS54YDR027C SEN54Q02825 467 aaPredicted RBP2.71□□□□□ -1.98
VPS54YDR027C TIF35Q04067 274 aaKnown RBP2.71□□□□□ -1.98
VPS54YDR027C TPO1Q07824 586 aa2.71□□□□□ -1.98
VPS54YDR027C RPL11BQ3E757 174 aaPredicted RBP2.71□□□□□ -1.98
VPS54YDR027C DCG1P32460 244 aa2.7□□□□□ -1.98
VPS54YDR027C ZRG8P40021 1076 aa2.7□□□□□ -1.98
VPS54YDR027C IOC3P43596 787 aa2.7□□□□□ -1.98
VPS54YDR027C SPP382Q06411 708 aaPredicted RBP2.7□□□□□ -1.98
VPS54YDR027C RTT10Q08924 1013 aa2.7□□□□□ -1.98
VPS54YDR027C ENA1P13587 1091 aa2.7□□□□□ -1.98
VPS54YDR027C HFM1P51979 1187 aa2.7□□□□□ -1.98
VPS54YDR027C ENA2Q01896 1091 aa2.7□□□□□ -1.98
VPS54YDR027C ESF1Q06344 628 aaKnown RBP2.7□□□□□ -1.98
VPS54YDR027C ENA5Q12691 1091 aa2.7□□□□□ -1.98
VPS54YDR027C DEF1P35732 738 aaKnown RBP2.69□□□□□ -1.98
VPS54YDR027C TMA46Q12000 345 aaKnown RBP2.69□□□□□ -1.98
VPS54YDR027C SLA2P33338 968 aa2.69□□□□□ -1.98
VPS54YDR027C CHS7P38843 316 aa2.69□□□□□ -1.98
VPS54YDR027C SIP5P40210 489 aaKnown RBP2.69□□□□□ -1.98
VPS54YDR027C MET12P46151 657 aa2.69□□□□□ -1.98
VPS54YDR027C SPR28Q04921 423 aa2.69□□□□□ -1.98
VPS54YDR027C HIS5P07172 385 aa2.68□□□□□ -1.98
VPS54YDR027C MSS4P38994 779 aa2.68□□□□□ -1.98
VPS54YDR027C KIN4Q01919 800 aa2.68□□□□□ -1.98
VPS54YDR027C ADY3Q07732 790 aa2.68□□□□□ -1.98
VPS54YDR027C OSW2Q12202 724 aa2.68□□□□□ -1.98
VPS54YDR027C RAD53P22216 821 aa2.68□□□□□ -1.98
VPS54YDR027C DBP2P24783 546 aaKnown RBP2.68□□□□□ -1.98
VPS54YDR027C YPT53P36019 220 aa2.68□□□□□ -1.98
VPS54YDR027C PNT1P38969 423 aa2.68□□□□□ -1.98
VPS54YDR027C AIM39Q08223 395 aa2.68□□□□□ -1.98
VPS54YDR027C FYV10P40492 516 aa2.67□□□□□ -1.98
VPS54YDR027C YJR107WP47145 328 aa2.67□□□□□ -1.98
VPS54YDR027C PFK1P16861 987 aaKnown RBP2.67□□□□□ -1.98
VPS54YDR027C LYP1P32487 611 aa2.67□□□□□ -1.98
VPS54YDR027C HRR25P29295 494 aaKnown RBP2.66□□□□□ -1.98
VPS54YDR027C INO1P11986 533 aa2.66□□□□□ -1.98
VPS54YDR027C ATE1P16639 503 aa2.66□□□□□ -1.98
VPS54YDR027C XYL2Q07993 356 aa2.66□□□□□ -1.98
VPS54YDR027C MOT2P34909 587 aaKnown RBP2.65□□□□□ -1.98
VPS54YDR027C YAP1801P38856 637 aa2.65□□□□□ -1.98
VPS54YDR027C CHA4P43634 648 aa2.65□□□□□ -1.98
VPS54YDR027C PSP2P50109 593 aaKnown RBP2.65□□□□□ -1.98
VPS54YDR027C EXG2P52911 562 aa2.65□□□□□ -1.98
VPS54YDR027C YGR012WP53206 393 aa2.65□□□□□ -1.98
VPS54YDR027C RMD1Q03441 430 aa2.65□□□□□ -1.98
VPS54YDR027C RKM4Q12504 494 aa2.65□□□□□ -1.98
VPS54YDR027C TRP2P00899 507 aaKnown RBP2.65□□□□□ -1.99
VPS54YDR027C CCC2P38995 1004 aa2.65□□□□□ -1.99
VPS54YDR027C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
VPS54YDR027C PPM2Q08282 695 aa2.65□□□□□ -1.99
VPS54YDR027C YKL107WP34251 309 aa2.65□□□□□ -1.99
VPS54YDR027C OAR1P35731 278 aa2.65□□□□□ -1.99
VPS54YDR027C SNF7P39929 240 aaKnown RBP2.65□□□□□ -1.99
VPS54YDR027C UBA2P52488 636 aa2.65□□□□□ -1.99
VPS54YDR027C MTC3P53077 123 aa2.65□□□□□ -1.99
VPS54YDR027C KCS1Q12494 1050 aa2.65□□□□□ -1.99
VPS54YDR027C SPE1P08432 466 aa2.64□□□□□ -1.99
VPS54YDR027C HSF1P10961 833 aa2.64□□□□□ -1.99
VPS54YDR027C SRP101P32916 621 aa2.64□□□□□ -1.99
VPS54YDR027C YGL176CP46945 554 aa2.64□□□□□ -1.99
VPS54YDR027C TYW3P53177 273 aa2.64□□□□□ -1.99
VPS54YDR027C YML122CQ03207 126 aa2.64□□□□□ -1.99
VPS54YDR027C SPO20Q04359 397 aa2.64□□□□□ -1.99
VPS54YDR027C MDM38Q08179 573 aa2.64□□□□□ -1.99
VPS54YDR027C YLL058WQ12198 575 aa2.64□□□□□ -1.99
VPS54YDR027C PET112P33893 541 aa2.63□□□□□ -1.99
VPS54YDR027C MOH1P38191 138 aa2.63□□□□□ -1.99
VPS54YDR027C CDA1Q06702 301 aa2.63□□□□□ -1.99
VPS54YDR027C NPC2Q12408 173 aa2.63□□□□□ -1.99
VPS54YDR027C HRQ1Q05549 1077 aa2.63□□□□□ -1.99
VPS54YDR027C RRP15Q06511 250 aaPredicted RBP2.63□□□□□ -1.99
VPS54YDR027C ENB1Q08299 606 aa2.63□□□□□ -1.99
VPS54YDR027C YPL066WQ12194 479 aa2.63□□□□□ -1.99
VPS54YDR027C FUN30P31380 1131 aa2.62□□□□□ -1.99
VPS54YDR027C DUT1P33317 147 aa2.62□□□□□ -1.99
VPS54YDR027C ECM21P38167 1117 aaKnown RBP2.62□□□□□ -1.99
VPS54YDR027C EEB1Q02891 456 aa2.62□□□□□ -1.99
VPS54YDR027C SRT1Q03175 343 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms