RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-238ENST00000641523 NCOA1Q15788 1441 aa9.48□□□□□ -0.89
CASC19-238ENST00000641523 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
CASC19-238ENST00000641523 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
CASC19-238ENST00000641523 PTPRKQ15262 1439 aa9.47□□□□□ -0.89
CASC19-238ENST00000641523 CLDN10P78369 228 aa9.47□□□□□ -0.89
CASC19-238ENST00000641523 ANKMY2Q8IV38 441 aa9.47□□□□□ -0.89
CASC19-238ENST00000641523 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
CASC19-238ENST00000641523 ZNF594Q96JF6 807 aaPredicted RBP9.47□□□□□ -0.89
CASC19-238ENST00000641523 CDCA7Q9BWT1 371 aaPredicted RBP9.47□□□□□ -0.89
CASC19-238ENST00000641523 CLTCQ00610 1675 aaKnown RBP9.47□□□□□ -0.89
CASC19-238ENST00000641523 MAST1Q9Y2H9 1570 aa9.47□□□□□ -0.89
CASC19-238ENST00000641523 WASHC2CQ9Y4E1 1318 aa9.46□□□□□ -0.89
CASC19-238ENST00000641523 MFAP1P55081 439 aaKnown RBP9.46□□□□□ -0.89
CASC19-238ENST00000641523 C1QTNF2Q9BXJ5 285 aa9.46□□□□□ -0.89
CASC19-238ENST00000641523 SLAIN2Q9P270 581 aa9.46□□□□□ -0.89
CASC19-238ENST00000641523 NOD1Q9Y239 953 aa9.46□□□□□ -0.89
CASC19-238ENST00000641523 PLA2R1Q13018 1463 aa9.46□□□□□ -0.89
CASC19-238ENST00000641523 DPYDQ12882 1025 aa9.46□□□□□ -0.9
CASC19-238ENST00000641523 DNAAF2Q9NVR5 837 aaKnown RBP9.46□□□□□ -0.9
CASC19-238ENST00000641523 PZPP20742 1482 aa9.45□□□□□ -0.9
CASC19-238ENST00000641523 SHANK2Q9UPX8 1470 aa9.45□□□□□ -0.9
CASC19-238ENST00000641523 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
CASC19-238ENST00000641523 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
CASC19-238ENST00000641523 CAMSAP1Q5T5Y3 1602 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 MYO3AQ8NEV4 1616 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 CEP170BQ9Y4F5 1589 aaPredicted RBP9.44□□□□□ -0.9
CASC19-238ENST00000641523 TNRQ92752 1358 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 ZBTB7BO15156 539 aaPredicted RBP9.44□□□□□ -0.9
CASC19-238ENST00000641523 KCNC4Q03721 635 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 RNF20Q5VTR2 975 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 PHLDB3Q6NSJ2 640 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 KIAA1024Q9UPX6 916 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 EIF2AK4Q9P2K8 1649 aaKnown RBP9.44□□□□□ -0.9
CASC19-238ENST00000641523 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
CASC19-238ENST00000641523 DUOX2Q9NRD8 1548 aa9.43□□□□□ -0.9
CASC19-238ENST00000641523 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
CASC19-238ENST00000641523 B4GALNT3Q6L9W6 998 aa9.43□□□□□ -0.9
CASC19-238ENST00000641523 FGD6Q6ZV73 1430 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 ERBINQ96RT1 1412 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 ESPNB1AK53 854 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 RAB15P59190 212 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 GTF2IP78347 998 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 RGS22Q8NE09 1264 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 PCDHB11Q9Y5F2 797 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 RNF17Q9BXT8 1623 aaKnown RBP9.42□□□□□ -0.9
CASC19-238ENST00000641523 TCOF1Q13428 1488 aaKnown RBP9.42□□□□□ -0.9
CASC19-238ENST00000641523 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
CASC19-238ENST00000641523 ZC3H13Q5T200 1668 aaKnown RBP9.42□□□□□ -0.9
CASC19-238ENST00000641523 TRIM32Q13049 653 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 TRMT44Q8IYL2 757 aaKnown RBP9.41□□□□□ -0.9
CASC19-238ENST00000641523 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 KIF15Q9NS87 1388 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 PTPN23Q9H3S7 1636 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 DKK1O94907 266 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 SSFA2P28290 1259 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 SKOR1P84550 965 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
CASC19-238ENST00000641523 ANKRD30AQ9BXX3 1397 aa9.41□□□□□ -0.9
CASC19-238ENST00000641523 ABCC5O15440 1437 aa9.4□□□□□ -0.9
CASC19-238ENST00000641523 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
CASC19-238ENST00000641523 THEMISQ8N1K5 641 aaPredicted RBP9.4□□□□□ -0.9
CASC19-238ENST00000641523 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
CASC19-238ENST00000641523 HCSTQ9UBK5 93 aa9.4□□□□□ -0.9
CASC19-238ENST00000641523 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.9
CASC19-238ENST00000641523 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
CASC19-238ENST00000641523 DAPK1P53355 1430 aa9.39□□□□□ -0.91
CASC19-238ENST00000641523 ABCC3O15438 1527 aa9.39□□□□□ -0.91
CASC19-238ENST00000641523 KANK1Q14678 1352 aa9.39□□□□□ -0.91
CASC19-238ENST00000641523 CCDC102BQ68D86 513 aa9.39□□□□□ -0.91
CASC19-238ENST00000641523 TXNDC2Q86VQ3 553 aa9.39□□□□□ -0.91
CASC19-238ENST00000641523 SIX5Q8N196 739 aa9.39□□□□□ -0.91
CASC19-238ENST00000641523 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
CASC19-238ENST00000641523 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
CASC19-238ENST00000641523 SFI1A8K8P3 1242 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 ATP2B4P23634 1241 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 PSME1Q06323 249 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 USP4Q13107 963 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 TPCN2Q8NHX9 752 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 DNMT1P26358 1616 aaKnown RBP9.38□□□□□ -0.91
CASC19-238ENST00000641523 CROCC2H7BZ55 1655 aa9.38□□□□□ -0.91
CASC19-238ENST00000641523 GGCXP38435 758 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 MYT1Q01538 1121 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 SND1Q7KZF4 910 aaKnown RBP eCLIP9.37□□□□□ -0.91
CASC19-238ENST00000641523 ANKLE2Q86XL3 938 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 PRDM15P57071 1507 aaPredicted RBP9.37□□□□□ -0.91
CASC19-238ENST00000641523 ARHGAP31Q2M1Z3 1444 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 UGGT1Q9NYU2 1555 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 LGR5O75473 907 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 VARSP26640 1264 aaKnown RBP9.37□□□□□ -0.91
CASC19-238ENST00000641523 SCNN1AP37088 669 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 SEC13P55735 322 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms