RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
SPIN3-240ENST00000640507 GRIN3BO60391 1043 aa20.94■□□□□ 0.94
SPIN3-240ENST00000640507 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
SPIN3-240ENST00000640507 TAF7Q15545 349 aaPredicted RBP20.94■□□□□ 0.94
SPIN3-240ENST00000640507 NARFQ9UHQ1 456 aa20.94■□□□□ 0.94
SPIN3-240ENST00000640507 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
SPIN3-240ENST00000640507 MAPK8IP3Q9UPT6 1336 aa20.93■□□□□ 0.94
SPIN3-240ENST00000640507 YBX3P16989 372 aaKnown RBP eCLIP20.93■□□□□ 0.94
SPIN3-240ENST00000640507 EIF5P55010 431 aaKnown RBP20.93■□□□□ 0.94
SPIN3-240ENST00000640507 USPL1Q5W0Q7 1092 aa20.93■□□□□ 0.94
SPIN3-240ENST00000640507 PRKRIP1Q9H875 184 aaPredicted RBP20.93■□□□□ 0.94
SPIN3-240ENST00000640507 COL15A1P39059 1388 aa20.92■□□□□ 0.94
SPIN3-240ENST00000640507 TM4SF1P30408 202 aa20.92■□□□□ 0.94
SPIN3-240ENST00000640507 UTRNP46939 3433 aa20.91■□□□□ 0.94
SPIN3-240ENST00000640507 TGFB2P61812 414 aa20.91■□□□□ 0.94
SPIN3-240ENST00000640507 A0A087WZG4 1122 aa20.9■□□□□ 0.94
SPIN3-240ENST00000640507 SNRPA1P09661 255 aaKnown RBP20.9■□□□□ 0.94
SPIN3-240ENST00000640507 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
SPIN3-240ENST00000640507 IL6STP40189 918 aaPredicted RBP20.89■□□□□ 0.94
SPIN3-240ENST00000640507 PNISRQ8TF01 805 aaKnown RBP20.89■□□□□ 0.94
SPIN3-240ENST00000640507 USP16Q9Y5T5 823 aa20.89■□□□□ 0.94
SPIN3-240ENST00000640507 A1BGP04217 495 aa20.88■□□□□ 0.93
SPIN3-240ENST00000640507 DDR1Q08345 913 aa20.88■□□□□ 0.93
SPIN3-240ENST00000640507 BCL2L12Q9HB09 334 aa20.87■□□□□ 0.93
SPIN3-240ENST00000640507 MIS18AQ9NYP9 233 aa20.87■□□□□ 0.93
SPIN3-240ENST00000640507 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
SPIN3-240ENST00000640507 POLRMTO00411 1230 aaKnown RBP20.87■□□□□ 0.93
SPIN3-240ENST00000640507 PRAMEF22A3QJZ6 481 aa20.86■□□□□ 0.93
SPIN3-240ENST00000640507 RIPK4P57078 832 aa20.86■□□□□ 0.93
SPIN3-240ENST00000640507 NPM2Q86SE8 214 aaKnown RBP20.86■□□□□ 0.93
SPIN3-240ENST00000640507 TMPOP42166 694 aaKnown RBP20.85■□□□□ 0.93
SPIN3-240ENST00000640507 NFIXQ14938 502 aa20.85■□□□□ 0.93
SPIN3-240ENST00000640507 WDR43Q15061 677 aaKnown RBP eCLIP20.85■□□□□ 0.93
SPIN3-240ENST00000640507 THUMPD2Q9BTF0 503 aaKnown RBP20.85■□□□□ 0.93
SPIN3-240ENST00000640507 A0A0G2JLW4 131 aa20.84■□□□□ 0.93
SPIN3-240ENST00000640507 TBC1D2BQ9UPU7 963 aa20.84■□□□□ 0.93
SPIN3-240ENST00000640507 ZNF330Q9Y3S2 320 aaPredicted RBP20.84■□□□□ 0.93
SPIN3-240ENST00000640507 PXDNLA1KZ92 1463 aa20.84■□□□□ 0.93
SPIN3-240ENST00000640507 WWC3Q9ULE0 1092 aa20.83■□□□□ 0.93
SPIN3-240ENST00000640507 ADAMTS8Q9UP79 889 aa20.83■□□□□ 0.93
SPIN3-240ENST00000640507 DPEP1P16444 411 aa20.82■□□□□ 0.92
SPIN3-240ENST00000640507 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
SPIN3-240ENST00000640507 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
SPIN3-240ENST00000640507 GOLGB1Q14789 3259 aaKnown RBP20.81■□□□□ 0.92
SPIN3-240ENST00000640507 ZNF316A6NFI3 1004 aaPredicted RBP20.81■□□□□ 0.92
SPIN3-240ENST00000640507 EIF4A1P60842 406 aaKnown RBP20.81■□□□□ 0.92
SPIN3-240ENST00000640507 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
SPIN3-240ENST00000640507 CCDC146Q8IYE0 955 aa20.81■□□□□ 0.92
SPIN3-240ENST00000640507 KIF13BQ9NQT8 1826 aa20.81■□□□□ 0.92
SPIN3-240ENST00000640507 SERPINB2P05120 415 aa20.8■□□□□ 0.92
SPIN3-240ENST00000640507 KCNA3P22001 575 aa20.8■□□□□ 0.92
SPIN3-240ENST00000640507 CHD4Q14839 1912 aa20.8■□□□□ 0.92
SPIN3-240ENST00000640507 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
SPIN3-240ENST00000640507 GIGYF1O75420 1035 aaPredicted RBP20.79■□□□□ 0.92
SPIN3-240ENST00000640507 PIP4K2AP48426 406 aaPredicted RBP20.79■□□□□ 0.92
SPIN3-240ENST00000640507 DZIP3Q86Y13 1208 aaKnown RBP20.79■□□□□ 0.92
SPIN3-240ENST00000640507 BABAM1Q9NWV8 329 aa20.79■□□□□ 0.92
SPIN3-240ENST00000640507 NBPF26B4DH59 902 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 CAMTA2O94983 1202 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 NBPF10Q6P3W6 841 aaKnown RBP20.78■□□□□ 0.92
SPIN3-240ENST00000640507 NBPF15Q8N660 670 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 BCS1LQ9Y276 419 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 NEUROD2Q15784 382 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 PIM2Q9P1W9 311 aa20.78■□□□□ 0.92
SPIN3-240ENST00000640507 RRP7AQ9Y3A4 280 aaKnown RBP20.78■□□□□ 0.92
SPIN3-240ENST00000640507 TSPYL4Q9UJ04 414 aa20.77■□□□□ 0.91
SPIN3-240ENST00000640507 CLEC4GQ6UXB4 293 aa20.76■□□□□ 0.91
SPIN3-240ENST00000640507 KIAA1551Q9HCM1 1747 aa20.75■□□□□ 0.91
SPIN3-240ENST00000640507 CHRNA5P30532 468 aa20.75■□□□□ 0.91
SPIN3-240ENST00000640507 SETDB2Q96T68 719 aa20.74■□□□□ 0.91
SPIN3-240ENST00000640507 TRIM35Q9UPQ4 493 aa20.74■□□□□ 0.91
SPIN3-240ENST00000640507 RGL2O15211 777 aa20.73■□□□□ 0.91
SPIN3-240ENST00000640507 KDM3BQ7LBC6 1761 aa20.73■□□□□ 0.91
SPIN3-240ENST00000640507 N4BP2Q86UW6 1770 aaPredicted RBP20.73■□□□□ 0.91
SPIN3-240ENST00000640507 CARMIL3Q8ND23 1372 aa20.73■□□□□ 0.91
SPIN3-240ENST00000640507 DALRD3Q5D0E6 543 aaKnown RBP20.72■□□□□ 0.91
SPIN3-240ENST00000640507 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
SPIN3-240ENST00000640507 NRXN2Q9P2S2 1712 aa20.71■□□□□ 0.91
SPIN3-240ENST00000640507 CHL1O00533 1208 aa20.7■□□□□ 0.9
SPIN3-240ENST00000640507 PRR5LQ6MZQ0 368 aa20.7■□□□□ 0.9
SPIN3-240ENST00000640507 SCN7AQ01118 1682 aa20.7■□□□□ 0.9
SPIN3-240ENST00000640507 ARHGAP27Q6ZUM4 889 aa20.7■□□□□ 0.9
SPIN3-240ENST00000640507 BRIP1Q9BX63 1249 aa20.7■□□□□ 0.9
SPIN3-240ENST00000640507 PDZRN3Q9UPQ7 1066 aa20.7■□□□□ 0.9
SPIN3-240ENST00000640507 ERBB4Q15303 1308 aa20.69■□□□□ 0.9
SPIN3-240ENST00000640507 H0YIN7 160 aa20.69■□□□□ 0.9
SPIN3-240ENST00000640507 AFDNP55196 1824 aaKnown RBP20.68■□□□□ 0.9
SPIN3-240ENST00000640507 ERVV-1B6SEH8 477 aa20.68■□□□□ 0.9
SPIN3-240ENST00000640507 APAF1O14727 1248 aa20.68■□□□□ 0.9
SPIN3-240ENST00000640507 PDE6BP35913 854 aa20.68■□□□□ 0.9
SPIN3-240ENST00000640507 CCDC184Q52MB2 194 aa20.68■□□□□ 0.9
SPIN3-240ENST00000640507 C2CD5Q86YS7 1000 aa20.68■□□□□ 0.9
SPIN3-240ENST00000640507 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
SPIN3-240ENST00000640507 CNBD1Q8NA66 436 aa20.68■□□□□ 0.9
SPIN3-240ENST00000640507 MYL6BP14649 208 aa20.67■□□□□ 0.9
SPIN3-240ENST00000640507 HLFQ16534 295 aa20.67■□□□□ 0.9
SPIN3-240ENST00000640507 NPHP1O15259 732 aa20.66■□□□□ 0.9
SPIN3-240ENST00000640507 ANP32CO43423 234 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms