RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 USP16Q9Y5T5 823 aa19.7■□□□□ 0.74
PAX6-268ENST00000640287 CICQ96RK0 1608 aaPredicted RBP19.7■□□□□ 0.74
PAX6-268ENST00000640287 ELL2O00472 640 aaPredicted RBP19.69■□□□□ 0.74
PAX6-268ENST00000640287 EIF2S2P20042 333 aaKnown RBP19.69■□□□□ 0.74
PAX6-268ENST00000640287 COL5A3P25940 1745 aaPredicted RBP19.69■□□□□ 0.74
PAX6-268ENST00000640287 R3HDM1Q15032 1099 aaKnown RBP19.69■□□□□ 0.74
PAX6-268ENST00000640287 CCDC87Q9NVE4 849 aa19.69■□□□□ 0.74
PAX6-268ENST00000640287 ZBED9Q6R2W3 1325 aa19.69■□□□□ 0.74
PAX6-268ENST00000640287 PSDA5PKW4 1024 aaPredicted RBP19.68■□□□□ 0.74
PAX6-268ENST00000640287 PHF14O94880 888 aa19.68■□□□□ 0.74
PAX6-268ENST00000640287 RC3H1Q5TC82 1133 aaKnown RBP19.68■□□□□ 0.74
PAX6-268ENST00000640287 DUSP27Q5VZP5 1158 aa19.68■□□□□ 0.74
PAX6-268ENST00000640287 CDCA7LQ96GN5 454 aa19.68■□□□□ 0.74
PAX6-268ENST00000640287 CANXP27824 592 aaKnown RBP19.67■□□□□ 0.74
PAX6-268ENST00000640287 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
PAX6-268ENST00000640287 RTCBQ9Y3I0 505 aaKnown RBP19.67■□□□□ 0.74
PAX6-268ENST00000640287 ZNF330Q9Y3S2 320 aaPredicted RBP19.67■□□□□ 0.74
PAX6-268ENST00000640287 MSH5O43196 834 aa19.67■□□□□ 0.74
PAX6-268ENST00000640287 A1BGP04217 495 aa19.67■□□□□ 0.74
PAX6-268ENST00000640287 SLFN5Q08AF3 891 aa19.67■□□□□ 0.74
PAX6-268ENST00000640287 INTS5Q6P9B9 1019 aaKnown RBP19.67■□□□□ 0.74
PAX6-268ENST00000640287 C8orf58Q8NAV2 365 aa19.67■□□□□ 0.74
PAX6-268ENST00000640287 ZBTB1Q9Y2K1 713 aa19.67■□□□□ 0.74
PAX6-268ENST00000640287 HOXB7P09629 217 aa19.66■□□□□ 0.74
PAX6-268ENST00000640287 EXOSC9Q06265 439 aaKnown RBP19.66■□□□□ 0.74
PAX6-268ENST00000640287 NPM2Q86SE8 214 aaKnown RBP19.66■□□□□ 0.74
PAX6-268ENST00000640287 LAMB4A4D0S4 1761 aa19.65■□□□□ 0.74
PAX6-268ENST00000640287 PIP4K2AP48426 406 aaPredicted RBP19.65■□□□□ 0.74
PAX6-268ENST00000640287 HDGFL1Q5TGJ6 251 aa19.65■□□□□ 0.74
PAX6-268ENST00000640287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
PAX6-268ENST00000640287 RPS6KA4O75676 772 aa19.64■□□□□ 0.73
PAX6-268ENST00000640287 TWISTNBQ3B726 338 aaPredicted RBP19.64■□□□□ 0.73
PAX6-268ENST00000640287 SMIM5Q71RC9 77 aa19.64■□□□□ 0.73
PAX6-268ENST00000640287 TSPYL6Q8N831 410 aa19.64■□□□□ 0.73
PAX6-268ENST00000640287 SSFA2P28290 1259 aa19.63■□□□□ 0.73
PAX6-268ENST00000640287 TRAPPC3LQ5T215 181 aa19.63■□□□□ 0.73
PAX6-268ENST00000640287 FLAD1Q8NFF5 587 aa19.63■□□□□ 0.73
PAX6-268ENST00000640287 PNPLA7Q6ZV29 1317 aa19.63■□□□□ 0.73
PAX6-268ENST00000640287 AMIGO3Q86WK7 504 aa19.62■□□□□ 0.73
PAX6-268ENST00000640287 ARXQ96QS3 562 aa19.62■□□□□ 0.73
PAX6-268ENST00000640287 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
PAX6-268ENST00000640287 SOS1Q07889 1333 aaPredicted RBP19.61■□□□□ 0.73
PAX6-268ENST00000640287 MYL6BP14649 208 aa19.61■□□□□ 0.73
PAX6-268ENST00000640287 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
PAX6-268ENST00000640287 COL15A1P39059 1388 aa19.61■□□□□ 0.73
PAX6-268ENST00000640287 ADRA2BP18089 450 aa19.6■□□□□ 0.73
PAX6-268ENST00000640287 IL6STP40189 918 aaPredicted RBP19.6■□□□□ 0.73
PAX6-268ENST00000640287 COL23A1Q86Y22 540 aaPredicted RBP19.6■□□□□ 0.73
PAX6-268ENST00000640287 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
PAX6-268ENST00000640287 ERBB4Q15303 1308 aa19.6■□□□□ 0.73
PAX6-268ENST00000640287 TUBGCP6Q96RT7 1819 aa19.6■□□□□ 0.73
PAX6-268ENST00000640287 NBPF26B4DH59 902 aa19.6■□□□□ 0.73
PAX6-268ENST00000640287 RFC4P35249 363 aa19.6■□□□□ 0.73
PAX6-268ENST00000640287 NBPF10Q6P3W6 841 aaKnown RBP19.6■□□□□ 0.73
PAX6-268ENST00000640287 NBPF15Q8N660 670 aa19.6■□□□□ 0.73
PAX6-268ENST00000640287 ARHGEF1Q92888 912 aaKnown RBP19.6■□□□□ 0.73
PAX6-268ENST00000640287 A0A087WZG4 1122 aa19.59■□□□□ 0.73
PAX6-268ENST00000640287 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
PAX6-268ENST00000640287 PDGFDQ9GZP0 370 aaPredicted RBP19.59■□□□□ 0.73
PAX6-268ENST00000640287 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
PAX6-268ENST00000640287 ANXA1P04083 346 aa19.58■□□□□ 0.72
PAX6-268ENST00000640287 EIF5P55010 431 aaKnown RBP19.58■□□□□ 0.72
PAX6-268ENST00000640287 TRMT2AQ8IZ69 625 aaKnown RBP19.58■□□□□ 0.72
PAX6-268ENST00000640287 STK31Q9BXU1 1019 aa19.58■□□□□ 0.72
PAX6-268ENST00000640287 DBF4Q9UBU7 674 aaPredicted RBP19.58■□□□□ 0.72
PAX6-268ENST00000640287 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
PAX6-268ENST00000640287 ZPR1O75312 459 aa19.57■□□□□ 0.72
PAX6-268ENST00000640287 VAMP4O75379 141 aa19.57■□□□□ 0.72
PAX6-268ENST00000640287 QSER1Q2KHR3 1735 aa19.57■□□□□ 0.72
PAX6-268ENST00000640287 PROSER3Q2NL68 480 aa19.56■□□□□ 0.72
PAX6-268ENST00000640287 DDX21Q9NR30 783 aaKnown RBP eCLIP19.56■□□□□ 0.72
PAX6-268ENST00000640287 ZBTB7AO95365 584 aa19.55■□□□□ 0.72
PAX6-268ENST00000640287 PDIA6Q15084 440 aa19.55■□□□□ 0.72
PAX6-268ENST00000640287 TBC1D2BQ9UPU7 963 aa19.55■□□□□ 0.72
PAX6-268ENST00000640287 DZIP3Q86Y13 1208 aaKnown RBP19.54■□□□□ 0.72
PAX6-268ENST00000640287 SRP68Q9UHB9 627 aaKnown RBP19.54■□□□□ 0.72
PAX6-268ENST00000640287 AIMP1Q12904 312 aaKnown RBP19.54■□□□□ 0.72
PAX6-268ENST00000640287 KIF6Q6ZMV9 814 aa19.54■□□□□ 0.72
PAX6-268ENST00000640287 HYPKQ9NX55 129 aa19.54■□□□□ 0.72
PAX6-268ENST00000640287 USPL1Q5W0Q7 1092 aa19.53■□□□□ 0.72
PAX6-268ENST00000640287 MSL1Q68DK7 614 aa19.53■□□□□ 0.72
PAX6-268ENST00000640287 SLC16A10Q8TF71 515 aa19.53■□□□□ 0.72
PAX6-268ENST00000640287 NARFQ9UHQ1 456 aa19.53■□□□□ 0.72
PAX6-268ENST00000640287 USP42Q9H9J4 1324 aaKnown RBP19.52■□□□□ 0.72
PAX6-268ENST00000640287 CASZ1Q86V15 1759 aa19.52■□□□□ 0.72
PAX6-268ENST00000640287 C4AP0C0L4 1744 aa19.52■□□□□ 0.72
PAX6-268ENST00000640287 SLC4A2P04920 1241 aa19.52■□□□□ 0.72
PAX6-268ENST00000640287 XAGE3Q8WTP9 111 aa19.52■□□□□ 0.72
PAX6-268ENST00000640287 CT47B1P0C2W7 299 aaPredicted RBP19.51■□□□□ 0.71
PAX6-268ENST00000640287 TTLL7Q6ZT98 887 aa19.51■□□□□ 0.71
PAX6-268ENST00000640287 COPS6Q7L5N1 327 aa19.51■□□□□ 0.71
PAX6-268ENST00000640287 MTFR1LQ9H019 292 aa19.51■□□□□ 0.71
PAX6-268ENST00000640287 ATF5Q9Y2D1 282 aaPredicted RBP19.51■□□□□ 0.71
PAX6-268ENST00000640287 GYS1P13807 737 aa19.49■□□□□ 0.71
PAX6-268ENST00000640287 LRP10Q7Z4F1 713 aa19.49■□□□□ 0.71
PAX6-268ENST00000640287 ZBTB3Q9H5J0 574 aa19.49■□□□□ 0.71
PAX6-268ENST00000640287 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
PAX6-268ENST00000640287 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
PAX6-268ENST00000640287 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
PAX6-268ENST00000640287 ZNF652Q9Y2D9 606 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms