RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TXLNAP40222 546 aa10.19□□□□□ -0.78
CCDC7-216ENST00000640058 FOXK2Q01167 660 aa10.19□□□□□ -0.78
CCDC7-216ENST00000640058 SRSF11Q05519 484 aaKnown RBP10.19□□□□□ -0.78
CCDC7-216ENST00000640058 CRTC2Q53ET0 693 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-216ENST00000640058 ARSJQ5FYB0 599 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-216ENST00000640058 LARP1Q6PKG0 1096 aaKnown RBP10.19□□□□□ -0.78
CCDC7-216ENST00000640058 SIX5Q8N196 739 aa10.19□□□□□ -0.78
CCDC7-216ENST00000640058 TSPAN10Q9H1Z9 355 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-216ENST00000640058 DKK1O94907 266 aa10.18□□□□□ -0.78
CCDC7-216ENST00000640058 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-216ENST00000640058 MX2P20592 715 aa10.18□□□□□ -0.78
CCDC7-216ENST00000640058 UBAP2LQ14157 1087 aaKnown RBP10.18□□□□□ -0.78
CCDC7-216ENST00000640058 KANK4Q5T7N3 995 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-216ENST00000640058 SH3PXD2AQ5TCZ1 1133 aa10.18□□□□□ -0.78
CCDC7-216ENST00000640058 ZMYND15Q9H091 742 aa10.18□□□□□ -0.78
CCDC7-216ENST00000640058 CRISPLD1Q9H336 500 aa10.18□□□□□ -0.78
CCDC7-216ENST00000640058 ZNF232Q9UNY5 417 aa10.18□□□□□ -0.78
CCDC7-216ENST00000640058 LGR5O75473 907 aa10.17□□□□□ -0.78
CCDC7-216ENST00000640058 RFX1P22670 979 aa10.17□□□□□ -0.78
CCDC7-216ENST00000640058 LBRQ14739 615 aaKnown RBP10.17□□□□□ -0.78
CCDC7-216ENST00000640058 CDCA8Q53HL2 280 aa10.17□□□□□ -0.78
CCDC7-216ENST00000640058 LYPD4Q6UWN0 246 aa10.17□□□□□ -0.78
CCDC7-216ENST00000640058 L3MBTL2Q969R5 705 aa10.17□□□□□ -0.78
CCDC7-216ENST00000640058 ABHD17AQ96GS6 310 aa10.17□□□□□ -0.78
CCDC7-216ENST00000640058 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
CCDC7-216ENST00000640058 NOS2P35228 1153 aa10.16□□□□□ -0.78
CCDC7-216ENST00000640058 CFAP70Q5T0N1 1121 aa10.16□□□□□ -0.78
CCDC7-216ENST00000640058 BICDL1Q6ZP65 573 aa10.16□□□□□ -0.78
CCDC7-216ENST00000640058 C1orf216Q8TAB5 229 aa10.16□□□□□ -0.78
CCDC7-216ENST00000640058 VRTNQ9H8Y1 702 aa10.16□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L15C9J2P7 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L10C9JJH3 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L13C9JLJ4 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L12C9JPN9 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L11C9JVI0 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L21D6R901 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L18D6R9N7 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L22D6RA61 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L17D6RBQ6 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L19D6RCP7 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L20D6RJB6 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 SEC13P55735 322 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 USP17L24Q0WX57 530 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 DPYDQ12882 1025 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 TEAD4Q15561 434 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 CFHR5Q9BXR6 569 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 ZCCHC2Q9C0B9 1178 aaKnown RBP10.15□□□□□ -0.78
CCDC7-216ENST00000640058 ZDHHC3Q9NYG2 299 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 PHF24Q9UPV7 400 aa10.15□□□□□ -0.78
CCDC7-216ENST00000640058 SERTM1A2A2V5 107 aa10.14□□□□□ -0.79
CCDC7-216ENST00000640058 BNIP3LO60238 219 aa10.14□□□□□ -0.79
CCDC7-216ENST00000640058 PTK7Q13308 1070 aa10.14□□□□□ -0.79
CCDC7-216ENST00000640058 ZIC5Q96T25 663 aa10.14□□□□□ -0.79
CCDC7-216ENST00000640058 GJA3Q9Y6H8 435 aa10.14□□□□□ -0.79
CCDC7-216ENST00000640058 DCDC2BA2VCK2 349 aa10.13□□□□□ -0.79
CCDC7-216ENST00000640058 M0R2N6 131 aa10.13□□□□□ -0.79
CCDC7-216ENST00000640058 CELA2BP08218 269 aaPredicted RBP10.13□□□□□ -0.79
CCDC7-216ENST00000640058 PSMA6P60900 246 aaKnown RBP10.13□□□□□ -0.79
CCDC7-216ENST00000640058 PPP1R12BO60237 982 aaPredicted RBP10.12□□□□□ -0.79
CCDC7-216ENST00000640058 MAP3K10Q02779 954 aa10.12□□□□□ -0.79
CCDC7-216ENST00000640058 ANKMY2Q8IV38 441 aa10.12□□□□□ -0.79
CCDC7-216ENST00000640058 GAS2L2Q8NHY3 880 aa10.12□□□□□ -0.79
CCDC7-216ENST00000640058 ACDQ96AP0 544 aa10.12□□□□□ -0.79
CCDC7-216ENST00000640058 HINFPQ9BQA5 517 aa10.12□□□□□ -0.79
CCDC7-216ENST00000640058 ATXN7L1Q9ULK2 861 aaPredicted RBP10.12□□□□□ -0.79
CCDC7-216ENST00000640058 NSFL1CQ9UNZ2 370 aaKnown RBP10.12□□□□□ -0.79
CCDC7-216ENST00000640058 HCN4Q9Y3Q4 1203 aa10.12□□□□□ -0.79
CCDC7-216ENST00000640058 FAM196BA6NMK8 535 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 EML1O00423 815 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 ATXN7O15265 892 aaPredicted RBP10.11□□□□□ -0.79
CCDC7-216ENST00000640058 FGFR3P22607 806 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 FIGNL1Q6PIW4 674 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
CCDC7-216ENST00000640058 SCG3Q8WXD2 468 aaKnown RBP10.11□□□□□ -0.79
CCDC7-216ENST00000640058 NDFIP2Q9NV92 336 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 ADAMTS8Q9UP79 889 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 CHMP3Q9Y3E7 222 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 PCDHGC4Q9Y5F7 938 aa10.11□□□□□ -0.79
CCDC7-216ENST00000640058 KHNYNO15037 678 aaKnown RBP10.1□□□□□ -0.79
CCDC7-216ENST00000640058 ARHGEF15O94989 841 aa10.1□□□□□ -0.79
CCDC7-216ENST00000640058 BMP4P12644 408 aa10.1□□□□□ -0.79
CCDC7-216ENST00000640058 CTBSQ01459 385 aa10.1□□□□□ -0.79
CCDC7-216ENST00000640058 KLRG1Q96E93 195 aa10.1□□□□□ -0.79
CCDC7-216ENST00000640058 ARID3CA6NKF2 412 aa10.09□□□□□ -0.79
CCDC7-216ENST00000640058 C21orf2O43822 256 aa10.09□□□□□ -0.79
CCDC7-216ENST00000640058 LRRC69Q6ZNQ3 347 aa10.09□□□□□ -0.79
CCDC7-216ENST00000640058 RHPN1Q8TCX5 695 aa10.09□□□□□ -0.79
CCDC7-216ENST00000640058 C2CD2LO14523 706 aa10.08□□□□□ -0.8
CCDC7-216ENST00000640058 MAP2K3P46734 347 aa10.08□□□□□ -0.8
CCDC7-216ENST00000640058 OXCT2Q9BYC2 517 aaPredicted RBP10.08□□□□□ -0.8
CCDC7-216ENST00000640058 PHACTR1Q9C0D0 580 aa10.08□□□□□ -0.8
CCDC7-216ENST00000640058 ATAD2Q6PL18 1390 aa10.08□□□□□ -0.8
CCDC7-216ENST00000640058 MAPTP10636 758 aaKnown RBP10.07□□□□□ -0.8
CCDC7-216ENST00000640058 CD33P20138 364 aa10.07□□□□□ -0.8
CCDC7-216ENST00000640058 NGLY1Q96IV0 654 aa10.07□□□□□ -0.8
CCDC7-216ENST00000640058 ARXQ96QS3 562 aa10.07□□□□□ -0.8
CCDC7-216ENST00000640058 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
CCDC7-216ENST00000640058 BCRP11274 1271 aa10.06□□□□□ -0.8
CCDC7-216ENST00000640058 TNP2Q05952 138 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms