RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 SIPA1L3O60292 1781 aaPredicted RBP23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 PI4KAP2A4QPH2 592 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 BEND3Q5T5X7 828 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 PI4KAP1Q8N8J0 262 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 ESYT1Q9BSJ8 1104 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 NBPF7P0C2Y1 421 aaPredicted RBP23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 POLA2Q14181 598 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 DNAAF4Q8WXU2 420 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 RILPL2Q969X0 211 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 IL1RAPL2Q9NP60 686 aa23.18■■□□□ 1.3
CROCCP2-206ENST00000639594 TRIM6-TRIM34B2RNG4 842 aa23.17■■□□□ 1.3
CROCCP2-206ENST00000639594 AXIN2Q9Y2T1 843 aa23.17■■□□□ 1.3
CROCCP2-206ENST00000639594 ST18O60284 1047 aa23.17■■□□□ 1.3
CROCCP2-206ENST00000639594 CHMLP26374 656 aa23.16■■□□□ 1.3
CROCCP2-206ENST00000639594 ADCY9O60503 1353 aa23.16■■□□□ 1.3
CROCCP2-206ENST00000639594 SURF6O75683 361 aaKnown RBP23.16■■□□□ 1.3
CROCCP2-206ENST00000639594 BRINP3Q76B58 766 aa23.16■■□□□ 1.3
CROCCP2-206ENST00000639594 UNC5CLQ8IV45 518 aa23.16■■□□□ 1.3
CROCCP2-206ENST00000639594 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
CROCCP2-206ENST00000639594 XRCC6P12956 609 aaKnown RBP eCLIP23.15■■□□□ 1.3
CROCCP2-206ENST00000639594 RAB11FIP3O75154 756 aa23.14■■□□□ 1.3
CROCCP2-206ENST00000639594 NUTM1Q86Y26 1132 aa23.14■■□□□ 1.3
CROCCP2-206ENST00000639594 CLEC17AQ6ZS10 378 aa23.14■■□□□ 1.29
CROCCP2-206ENST00000639594 AOX1Q06278 1338 aa23.13■■□□□ 1.29
CROCCP2-206ENST00000639594 SRGAP3O43295 1099 aa23.13■■□□□ 1.29
CROCCP2-206ENST00000639594 OVOS2A0A0G2JMS6 1433 aa23.13■■□□□ 1.29
CROCCP2-206ENST00000639594 NPHP3Q7Z494 1330 aa23.13■■□□□ 1.29
CROCCP2-206ENST00000639594 SLAIN2Q9P270 581 aa23.13■■□□□ 1.29
CROCCP2-206ENST00000639594 RHPN1Q8TCX5 695 aa23.12■■□□□ 1.29
CROCCP2-206ENST00000639594 DBF4Q9UBU7 674 aaPredicted RBP23.12■■□□□ 1.29
CROCCP2-206ENST00000639594 GIGYF1O75420 1035 aaPredicted RBP23.11■■□□□ 1.29
CROCCP2-206ENST00000639594 PTMSP20962 102 aa23.11■■□□□ 1.29
CROCCP2-206ENST00000639594 BAG4O95429 457 aaKnown RBP23.11■■□□□ 1.29
CROCCP2-206ENST00000639594 PROSER3Q2NL68 480 aa23.11■■□□□ 1.29
CROCCP2-206ENST00000639594 SKOR2Q2VWA4 1001 aaPredicted RBP23.11■■□□□ 1.29
CROCCP2-206ENST00000639594 PRAMEF22A3QJZ6 481 aa23.1■■□□□ 1.29
CROCCP2-206ENST00000639594 ZGPATQ8N5A5 531 aaKnown RBP23.1■■□□□ 1.29
CROCCP2-206ENST00000639594 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
CROCCP2-206ENST00000639594 ADAMTS7Q9UKP4 1686 aa23.1■■□□□ 1.29
CROCCP2-206ENST00000639594 CYP2E1P05181 493 aaPredicted RBP23.09■■□□□ 1.29
CROCCP2-206ENST00000639594 NUCB2P80303 420 aa23.09■■□□□ 1.29
CROCCP2-206ENST00000639594 CWC22Q9HCG8 908 aaKnown RBP23.09■■□□□ 1.29
CROCCP2-206ENST00000639594 ANO2Q9NQ90 1003 aa23.09■■□□□ 1.29
CROCCP2-206ENST00000639594 PALD1Q9ULE6 856 aa23.09■■□□□ 1.29
CROCCP2-206ENST00000639594 NEK4P51957 841 aa23.08■■□□□ 1.29
CROCCP2-206ENST00000639594 PKP1Q13835 747 aa23.08■■□□□ 1.29
CROCCP2-206ENST00000639594 KIF1BPQ96EK5 621 aa23.08■■□□□ 1.29
CROCCP2-206ENST00000639594 MAP3K2Q9Y2U5 619 aa23.08■■□□□ 1.29
CROCCP2-206ENST00000639594 ZC3H6P61129 1189 aaKnown RBP23.08■■□□□ 1.29
CROCCP2-206ENST00000639594 PI4K2BQ8TCG2 481 aa23.08■■□□□ 1.29
CROCCP2-206ENST00000639594 PANK2Q9BZ23 570 aa23.08■■□□□ 1.29
CROCCP2-206ENST00000639594 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.28
CROCCP2-206ENST00000639594 MAP4K4O95819 1239 aaPredicted RBP23.07■■□□□ 1.28
CROCCP2-206ENST00000639594 MCCP23508 829 aa23.07■■□□□ 1.28
CROCCP2-206ENST00000639594 SCN11AQ9UI33 1791 aa23.07■■□□□ 1.28
CROCCP2-206ENST00000639594 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
CROCCP2-206ENST00000639594 IL25Q9H293 177 aa23.07■■□□□ 1.28
CROCCP2-206ENST00000639594 GOLGA6L22H0YM25 854 aa23.06■■□□□ 1.28
CROCCP2-206ENST00000639594 ERBB3P21860 1342 aa23.06■■□□□ 1.28
CROCCP2-206ENST00000639594 CRYBG1Q9Y4K1 1723 aa23.06■■□□□ 1.28
CROCCP2-206ENST00000639594 KSR2Q6VAB6 950 aa23.06■■□□□ 1.28
CROCCP2-206ENST00000639594 SPATA31A3Q5VYP0 1347 aa23.05■■□□□ 1.28
CROCCP2-206ENST00000639594 MRE11P49959 708 aa23.05■■□□□ 1.28
CROCCP2-206ENST00000639594 ALDH1L1O75891 902 aa23.04■■□□□ 1.28
CROCCP2-206ENST00000639594 C5P01031 1676 aa23.04■■□□□ 1.28
CROCCP2-206ENST00000639594 ANAPC15P60006 121 aa23.04■■□□□ 1.28
CROCCP2-206ENST00000639594 C9orf78Q9NZ63 289 aaPredicted RBP23.04■■□□□ 1.28
CROCCP2-206ENST00000639594 CWF19L2Q2TBE0 894 aaKnown RBP23.03■■□□□ 1.28
CROCCP2-206ENST00000639594 TMX3Q96JJ7 454 aa23.03■■□□□ 1.28
CROCCP2-206ENST00000639594 GRPEL1Q9HAV7 217 aa23.03■■□□□ 1.28
CROCCP2-206ENST00000639594 MTX1Q13505 466 aa23.03■■□□□ 1.28
CROCCP2-206ENST00000639594 HSP90AB4PQ58FF6 505 aa23.03■■□□□ 1.28
CROCCP2-206ENST00000639594 MCTP1Q6DN14 999 aa23.03■■□□□ 1.28
CROCCP2-206ENST00000639594 GAS2L3Q86XJ1 694 aa23.03■■□□□ 1.28
CROCCP2-206ENST00000639594 FAM43AQ8N2R8 423 aa23.02■■□□□ 1.28
CROCCP2-206ENST00000639594 HYPKQ9NX55 129 aa23.02■■□□□ 1.28
CROCCP2-206ENST00000639594 ZDHHC9Q9Y397 364 aa23.02■■□□□ 1.28
CROCCP2-206ENST00000639594 ISY1Q9ULR0 285 aaKnown RBP23.01■■□□□ 1.27
CROCCP2-206ENST00000639594 COL18A1P39060 1754 aa23.01■■□□□ 1.27
CROCCP2-206ENST00000639594 OS9Q13438 667 aaPredicted RBP23.01■■□□□ 1.27
CROCCP2-206ENST00000639594 IL17RAQ96F46 866 aa23.01■■□□□ 1.27
CROCCP2-206ENST00000639594 MCM2P49736 904 aa23■■□□□ 1.27
CROCCP2-206ENST00000639594 SOS2Q07890 1332 aaPredicted RBP23■■□□□ 1.27
CROCCP2-206ENST00000639594 LTBP4Q8N2S1 1624 aa23■■□□□ 1.27
CROCCP2-206ENST00000639594 SLC39A6Q13433 755 aa23■■□□□ 1.27
CROCCP2-206ENST00000639594 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
CROCCP2-206ENST00000639594 DDX49Q9Y6V7 483 aaKnown RBP23■■□□□ 1.27
CROCCP2-206ENST00000639594 AIMP1Q12904 312 aaKnown RBP22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 PDIA6Q15084 440 aa22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 KLHL40Q2TBA0 621 aa22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 RAPGEF4Q8WZA2 1011 aa22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 DDX21Q9NR30 783 aaKnown RBP eCLIP22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 USP42Q9H9J4 1324 aaKnown RBP22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 CNTROBQ8N137 903 aa22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 PA2G4Q9UQ80 394 aaKnown RBP22.99■■□□□ 1.27
CROCCP2-206ENST00000639594 KDM6AO15550 1401 aaPredicted RBP22.98■■□□□ 1.27
CROCCP2-206ENST00000639594 NHSL1Q5SYE7 1610 aa22.98■■□□□ 1.27
CROCCP2-206ENST00000639594 EPB41L2O43491 1005 aaKnown RBP22.98■■□□□ 1.27
CROCCP2-206ENST00000639594 SGSM2O43147 1006 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms