RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ZBTB1Q9Y2K1 713 aa28.65■■■□□ 2.18
SCN1B-206ENST00000638536 TRAPPC3LQ5T215 181 aa28.65■■■□□ 2.18
SCN1B-206ENST00000638536 USP16Q9Y5T5 823 aa28.65■■■□□ 2.18
SCN1B-206ENST00000638536 LMOD3Q0VAK6 560 aa28.62■■■□□ 2.17
SCN1B-206ENST00000638536 PPP1R1BQ9UD71 204 aaPredicted RBP28.62■■■□□ 2.17
SCN1B-206ENST00000638536 GOLGB1Q14789 3259 aaKnown RBP28.6■■■□□ 2.17
SCN1B-206ENST00000638536 SOS1Q07889 1333 aaPredicted RBP28.6■■■□□ 2.17
SCN1B-206ENST00000638536 A1BGP04217 495 aa28.6■■■□□ 2.17
SCN1B-206ENST00000638536 CANXP27824 592 aaKnown RBP28.6■■■□□ 2.17
SCN1B-206ENST00000638536 UTRNP46939 3433 aa28.59■■■□□ 2.17
SCN1B-206ENST00000638536 STARD3NLO95772 234 aa28.59■■■□□ 2.17
SCN1B-206ENST00000638536 EIF4A1P60842 406 aaKnown RBP28.59■■■□□ 2.17
SCN1B-206ENST00000638536 SNRPA1P09661 255 aaKnown RBP28.58■■■□□ 2.17
SCN1B-206ENST00000638536 ADRA2BP18089 450 aa28.58■■■□□ 2.17
SCN1B-206ENST00000638536 FAM9BQ8IZU0 186 aa28.58■■■□□ 2.17
SCN1B-206ENST00000638536 ARXQ96QS3 562 aa28.58■■■□□ 2.17
SCN1B-206ENST00000638536 SRP68Q9UHB9 627 aaKnown RBP28.58■■■□□ 2.17
SCN1B-206ENST00000638536 TSPYL4Q9UJ04 414 aa28.58■■■□□ 2.17
SCN1B-206ENST00000638536 RFC4P35249 363 aa28.58■■■□□ 2.17
SCN1B-206ENST00000638536 PIP4K2AP48426 406 aaPredicted RBP28.58■■■□□ 2.17
SCN1B-206ENST00000638536 TEX13AQ9BXU3 409 aaPredicted RBP28.58■■■□□ 2.17
SCN1B-206ENST00000638536 GYS1P13807 737 aa28.55■■■□□ 2.16
SCN1B-206ENST00000638536 POLD1P28340 1107 aa28.55■■■□□ 2.16
SCN1B-206ENST00000638536 GIGYF1O75420 1035 aaPredicted RBP28.54■■■□□ 2.16
SCN1B-206ENST00000638536 FHDC1Q9C0D6 1143 aaPredicted RBP28.54■■■□□ 2.16
SCN1B-206ENST00000638536 LAS1LQ9Y4W2 734 aaKnown RBP28.54■■■□□ 2.16
SCN1B-206ENST00000638536 CHL1O00533 1208 aa28.54■■■□□ 2.16
SCN1B-206ENST00000638536 EIF5P55010 431 aaKnown RBP28.54■■■□□ 2.16
SCN1B-206ENST00000638536 COL15A1P39059 1388 aa28.53■■■□□ 2.16
SCN1B-206ENST00000638536 USP42Q9H9J4 1324 aaKnown RBP28.52■■■□□ 2.16
SCN1B-206ENST00000638536 LAMB4A4D0S4 1761 aa28.52■■■□□ 2.16
SCN1B-206ENST00000638536 NBPF26B4DH59 902 aa28.51■■■□□ 2.15
SCN1B-206ENST00000638536 KRT24Q2M2I5 525 aa28.51■■■□□ 2.15
SCN1B-206ENST00000638536 NBPF10Q6P3W6 841 aaKnown RBP28.51■■■□□ 2.15
SCN1B-206ENST00000638536 NBPF15Q8N660 670 aa28.51■■■□□ 2.15
SCN1B-206ENST00000638536 ZNF330Q9Y3S2 320 aaPredicted RBP28.51■■■□□ 2.15
SCN1B-206ENST00000638536 FKBP8Q14318 412 aa28.5■■■□□ 2.15
SCN1B-206ENST00000638536 USPL1Q5W0Q7 1092 aa28.5■■■□□ 2.15
SCN1B-206ENST00000638536 DIEXFQ68CQ4 756 aaKnown RBP28.5■■■□□ 2.15
SCN1B-206ENST00000638536 SYT17Q9BSW7 474 aa28.5■■■□□ 2.15
SCN1B-206ENST00000638536 BABAM1Q9NWV8 329 aa28.5■■■□□ 2.15
SCN1B-206ENST00000638536 IL6STP40189 918 aaPredicted RBP28.48■■■□□ 2.15
SCN1B-206ENST00000638536 BCL2L12Q9HB09 334 aa28.48■■■□□ 2.15
SCN1B-206ENST00000638536 SALL2Q9Y467 1007 aaPredicted RBP28.48■■■□□ 2.15
SCN1B-206ENST00000638536 MMP10P09238 476 aa28.47■■■□□ 2.15
SCN1B-206ENST00000638536 KLHL34Q8N239 644 aa28.47■■■□□ 2.15
SCN1B-206ENST00000638536 CFAP44Q96MT7 982 aa28.47■■■□□ 2.15
SCN1B-206ENST00000638536 NARFQ9UHQ1 456 aa28.47■■■□□ 2.15
SCN1B-206ENST00000638536 ZNF853P0CG23 659 aa28.47■■■□□ 2.15
SCN1B-206ENST00000638536 NLGN1Q8N2Q7 840 aa28.47■■■□□ 2.15
SCN1B-206ENST00000638536 WWC1Q8IX03 1113 aa28.46■■■□□ 2.15
SCN1B-206ENST00000638536 MBIPQ9NS73 344 aa28.46■■■□□ 2.15
SCN1B-206ENST00000638536 TBC1D2BQ9UPU7 963 aa28.46■■■□□ 2.15
SCN1B-206ENST00000638536 ZPR1O75312 459 aa28.45■■■□□ 2.14
SCN1B-206ENST00000638536 CCDC27Q2M243 656 aa28.43■■■□□ 2.14
SCN1B-206ENST00000638536 MIER1Q8N108 512 aa28.43■■■□□ 2.14
SCN1B-206ENST00000638536 NLGN2Q8NFZ4 835 aa28.42■■■□□ 2.14
SCN1B-206ENST00000638536 CCER2I3L3R5 266 aa28.41■■■□□ 2.14
SCN1B-206ENST00000638536 DDR1Q08345 913 aa28.41■■■□□ 2.14
SCN1B-206ENST00000638536 IFT57Q9NWB7 429 aa28.41■■■□□ 2.14
SCN1B-206ENST00000638536 EIF2S2P20042 333 aaKnown RBP28.4■■■□□ 2.14
SCN1B-206ENST00000638536 SCN7AQ01118 1682 aa28.4■■■□□ 2.14
SCN1B-206ENST00000638536 TM4SF1P30408 202 aa28.4■■■□□ 2.14
SCN1B-206ENST00000638536 NECTIN2Q92692 538 aa28.4■■■□□ 2.14
SCN1B-206ENST00000638536 A0A087WZG4 1122 aa28.39■■■□□ 2.13
SCN1B-206ENST00000638536 GNAI1P63096 354 aa28.39■■■□□ 2.13
SCN1B-206ENST00000638536 DZIP3Q86Y13 1208 aaKnown RBP28.39■■■□□ 2.13
SCN1B-206ENST00000638536 BCORQ6W2J9 1755 aa28.38■■■□□ 2.13
SCN1B-206ENST00000638536 CAMTA2O94983 1202 aa28.38■■■□□ 2.13
SCN1B-206ENST00000638536 NGEFQ8N5V2 710 aa28.38■■■□□ 2.13
SCN1B-206ENST00000638536 AFDNP55196 1824 aaKnown RBP28.37■■■□□ 2.13
SCN1B-206ENST00000638536 MYL6BP14649 208 aa28.37■■■□□ 2.13
SCN1B-206ENST00000638536 CALD1Q05682 793 aaKnown RBP28.37■■■□□ 2.13
SCN1B-206ENST00000638536 NFIXQ14938 502 aa28.37■■■□□ 2.13
SCN1B-206ENST00000638536 PDIA6Q15084 440 aa28.37■■■□□ 2.13
SCN1B-206ENST00000638536 ANXA1P04083 346 aa28.36■■■□□ 2.13
SCN1B-206ENST00000638536 POLRMTO00411 1230 aaKnown RBP28.36■■■□□ 2.13
SCN1B-206ENST00000638536 PROSER3Q2NL68 480 aa28.36■■■□□ 2.13
SCN1B-206ENST00000638536 NCBP3Q53F19 620 aaKnown RBP28.36■■■□□ 2.13
SCN1B-206ENST00000638536 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
SCN1B-206ENST00000638536 TBC1D9BQ66K14 1250 aa28.35■■■□□ 2.13
SCN1B-206ENST00000638536 LRP10Q7Z4F1 713 aa28.35■■■□□ 2.13
SCN1B-206ENST00000638536 PARP3Q9Y6F1 533 aa28.35■■■□□ 2.13
SCN1B-206ENST00000638536 BICDL1Q6ZP65 573 aa28.34■■■□□ 2.13
SCN1B-206ENST00000638536 NPM2Q86SE8 214 aaKnown RBP28.34■■■□□ 2.13
SCN1B-206ENST00000638536 KIF13BQ9NQT8 1826 aa28.34■■■□□ 2.13
SCN1B-206ENST00000638536 ELL2O00472 640 aaPredicted RBP28.33■■■□□ 2.13
SCN1B-206ENST00000638536 DUSP27Q5VZP5 1158 aa28.33■■■□□ 2.13
SCN1B-206ENST00000638536 CD2APQ9Y5K6 639 aa28.33■■■□□ 2.13
SCN1B-206ENST00000638536 TTLL7Q6ZT98 887 aa28.32■■■□□ 2.12
SCN1B-206ENST00000638536 C8orf58Q8NAV2 365 aa28.32■■■□□ 2.12
SCN1B-206ENST00000638536 SPINK5Q9NQ38 1064 aaPredicted RBP28.32■■■□□ 2.12
SCN1B-206ENST00000638536 HLFQ16534 295 aa28.31■■■□□ 2.12
SCN1B-206ENST00000638536 NUP98P52948 1817 aa28.3■■■□□ 2.12
SCN1B-206ENST00000638536 KIAA1551Q9HCM1 1747 aa28.3■■■□□ 2.12
SCN1B-206ENST00000638536 N4BP2Q86UW6 1770 aaPredicted RBP28.3■■■□□ 2.12
SCN1B-206ENST00000638536 NRXN2Q9P2S2 1712 aa28.29■■■□□ 2.12
SCN1B-206ENST00000638536 TSPYL6Q8N831 410 aa28.29■■■□□ 2.12
SCN1B-206ENST00000638536 C10orf71Q711Q0 1435 aa28.29■■■□□ 2.12
SCN1B-206ENST00000638536 ERBB4Q15303 1308 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms