RNA–Protein interactions for RNA: ENST00000638463.1

EGFR-211, Transcript of epidermal growth factor receptor, humanhuman

TSL 5 BASIC

Gene EGFR, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-211ENST00000638463 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
EGFR-211ENST00000638463 FAM200AQ8TCP9 573 aa12.89□□□□□ -0.35
EGFR-211ENST00000638463 DDX54Q8TDD1 881 aaKnown RBP12.89□□□□□ -0.35
EGFR-211ENST00000638463 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
EGFR-211ENST00000638463 LIMCH1Q9UPQ0 1083 aa12.89□□□□□ -0.35
EGFR-211ENST00000638463 EXOC6BQ9Y2D4 811 aa12.89□□□□□ -0.35
EGFR-211ENST00000638463 STX1AQ16623 288 aa12.89□□□□□ -0.35
EGFR-211ENST00000638463 CCDC150Q8NCX0 1101 aa12.89□□□□□ -0.35
EGFR-211ENST00000638463 GPATCH8Q9UKJ3 1502 aaKnown RBP12.89□□□□□ -0.35
EGFR-211ENST00000638463 SPA17Q15506 151 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
EGFR-211ENST00000638463 VPS18Q9P253 973 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 BIN1O00499 593 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 TRIM22Q8IYM9 498 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 ZBTB9Q96C00 473 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
EGFR-211ENST00000638463 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 SMARCA5O60264 1052 aaPredicted RBP12.88□□□□□ -0.35
EGFR-211ENST00000638463 PHACTR2O75167 634 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 KRT32Q14532 448 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
EGFR-211ENST00000638463 SYCP1Q15431 976 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 TCEAL9Q9UHQ7 104 aa12.88□□□□□ -0.35
EGFR-211ENST00000638463 MX1P20591 662 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 DNA2P51530 1060 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 RAB3GAP1Q15042 981 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
EGFR-211ENST00000638463 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 SSH1Q8WYL5 1049 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 HLTFQ14527 1009 aaKnown RBP eCLIP12.87□□□□□ -0.35
EGFR-211ENST00000638463 OTUD6BQ8N6M0 293 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 CTTNBP2Q8WZ74 1663 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
EGFR-211ENST00000638463 PTGS1P23219 599 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 ATRIPQ8WXE1 791 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 CCDC43Q96MW1 224 aaKnown RBP12.87□□□□□ -0.35
EGFR-211ENST00000638463 SIL1Q9H173 461 aa12.87□□□□□ -0.35
EGFR-211ENST00000638463 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
EGFR-211ENST00000638463 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
EGFR-211ENST00000638463 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
EGFR-211ENST00000638463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.35
EGFR-211ENST00000638463 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
EGFR-211ENST00000638463 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
EGFR-211ENST00000638463 USP48Q86UV5 1035 aa12.86□□□□□ -0.35
EGFR-211ENST00000638463 ZNF428Q96B54 188 aa12.86□□□□□ -0.35
EGFR-211ENST00000638463 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
EGFR-211ENST00000638463 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
EGFR-211ENST00000638463 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
EGFR-211ENST00000638463 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
EGFR-211ENST00000638463 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
EGFR-211ENST00000638463 FYB1O15117 783 aa12.85□□□□□ -0.35
EGFR-211ENST00000638463 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
EGFR-211ENST00000638463 SNX21Q969T3 373 aa12.85□□□□□ -0.35
EGFR-211ENST00000638463 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
EGFR-211ENST00000638463 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
EGFR-211ENST00000638463 RBSNQ9H1K0 784 aa12.85□□□□□ -0.35
EGFR-211ENST00000638463 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 VPS37DQ86XT2 251 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
EGFR-211ENST00000638463 CTAGE15A4D2H0 777 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 CTAGE8P0CG41 777 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 GJB2P29033 226 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 NAA25Q14CX7 972 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 NBPF11Q86T75 865 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 CTAGE6Q86UF2 777 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 CTAGE4Q8IX94 777 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
EGFR-211ENST00000638463 G3V3G9 751 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
EGFR-211ENST00000638463 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.35
EGFR-211ENST00000638463 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 SMC5Q8IY18 1101 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 TSC1Q92574 1164 aa12.84□□□□□ -0.35
EGFR-211ENST00000638463 CNPY2Q9Y2B0 182 aa12.83□□□□□ -0.35
EGFR-211ENST00000638463 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 CDKL5O76039 1030 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 AACSQ86V21 672 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 RALGAPBQ86X10 1494 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 USO1O60763 962 aaKnown RBP12.83□□□□□ -0.36
EGFR-211ENST00000638463 YEATS4O95619 227 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.36
EGFR-211ENST00000638463 SCLT1Q96NL6 688 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
EGFR-211ENST00000638463 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
EGFR-211ENST00000638463 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
EGFR-211ENST00000638463 CPSF2Q9P2I0 782 aaKnown RBP12.82□□□□□ -0.36
EGFR-211ENST00000638463 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
EGFR-211ENST00000638463 HSF2BPO75031 334 aa12.82□□□□□ -0.36
EGFR-211ENST00000638463 SEC24BO95487 1268 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms