RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 ATP2B1P20020 1258 aa10.3□□□□□ -0.76
SCARB2-209ENST00000638409 DNAJA1P31689 397 aaKnown RBP10.3□□□□□ -0.76
SCARB2-209ENST00000638409 FAM174AQ8TBP5 190 aa10.3□□□□□ -0.76
SCARB2-209ENST00000638409 DMGDHQ9UI17 866 aaKnown RBP10.3□□□□□ -0.76
SCARB2-209ENST00000638409 PIK3C2GO75747 1445 aa10.3□□□□□ -0.76
SCARB2-209ENST00000638409 PIK3R4Q99570 1358 aa10.3□□□□□ -0.76
SCARB2-209ENST00000638409 SETD1AO15047 1707 aaKnown RBP10.3□□□□□ -0.76
SCARB2-209ENST00000638409 SKIP12755 728 aa10.3□□□□□ -0.76
SCARB2-209ENST00000638409 CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
SCARB2-209ENST00000638409 SIN3AQ96ST3 1273 aa10.3□□□□□ -0.76
SCARB2-209ENST00000638409 ACBD3Q9H3P7 528 aa10.3□□□□□ -0.76
SCARB2-209ENST00000638409 RASA1P20936 1047 aa10.29□□□□□ -0.76
SCARB2-209ENST00000638409 SLFNL1Q499Z3 407 aa10.29□□□□□ -0.76
SCARB2-209ENST00000638409 JAZF1Q86VZ6 243 aa10.29□□□□□ -0.76
SCARB2-209ENST00000638409 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
SCARB2-209ENST00000638409 KCNB2Q92953 911 aa10.29□□□□□ -0.76
SCARB2-209ENST00000638409 LTBP4Q8N2S1 1624 aa10.29□□□□□ -0.76
SCARB2-209ENST00000638409 ECM1Q16610 540 aa10.29□□□□□ -0.76
SCARB2-209ENST00000638409 EAPPQ56P03 285 aaPredicted RBP10.29□□□□□ -0.76
SCARB2-209ENST00000638409 CHD2O14647 1828 aaKnown RBP10.28□□□□□ -0.76
SCARB2-209ENST00000638409 NWD1Q149M9 1564 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 ADGRF5Q8IZF2 1346 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 PRMT3O60678 531 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 NEUROD1Q13562 356 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
SCARB2-209ENST00000638409 GLYCTKQ8IVS8 523 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 ALKQ9UM73 1620 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 LGR5O75473 907 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 LAMC1P11047 1609 aa10.28□□□□□ -0.76
SCARB2-209ENST00000638409 PHF14O94880 888 aa10.27□□□□□ -0.76
SCARB2-209ENST00000638409 TMEM87AQ8NBN3 555 aa10.27□□□□□ -0.76
SCARB2-209ENST00000638409 CPS1P31327 1500 aa10.27□□□□□ -0.77
SCARB2-209ENST00000638409 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
SCARB2-209ENST00000638409 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.77
SCARB2-209ENST00000638409 CFAP99D6REC4 459 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 GJA5P36382 358 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 DCAF11Q8TEB1 546 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 SLC26A8Q96RN1 970 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 GABBR1Q9UBS5 961 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 PRAG1Q86YV5 1406 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 P4HBP07237 508 aaKnown RBP10.26□□□□□ -0.77
SCARB2-209ENST00000638409 KCNA6P17658 529 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 ZNF594Q96JF6 807 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-209ENST00000638409 KIAA1210Q9ULL0 1709 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 KCNH2Q12809 1159 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 NCOA4Q13772 614 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 L3MBTL2Q969R5 705 aa10.26□□□□□ -0.77
SCARB2-209ENST00000638409 C14orf93Q9H972 538 aaKnown RBP10.26□□□□□ -0.77
SCARB2-209ENST00000638409 ZNF335Q9H4Z2 1342 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-209ENST00000638409 ANO8Q9HCE9 1232 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-209ENST00000638409 NKTRP30414 1462 aaKnown RBP10.25□□□□□ -0.77
SCARB2-209ENST00000638409 ICMTO60725 284 aa10.25□□□□□ -0.77
SCARB2-209ENST00000638409 EIF4G2P78344 907 aaKnown RBP eCLIP10.25□□□□□ -0.77
SCARB2-209ENST00000638409 PDCD7Q8N8D1 485 aaKnown RBP10.25□□□□□ -0.77
SCARB2-209ENST00000638409 DCTN4Q9UJW0 460 aa10.25□□□□□ -0.77
SCARB2-209ENST00000638409 MRPL42Q9Y6G3 142 aaKnown RBP10.25□□□□□ -0.77
SCARB2-209ENST00000638409 XRN1Q8IZH2 1706 aaKnown RBP10.25□□□□□ -0.77
SCARB2-209ENST00000638409 IQSEC2Q5JU85 1478 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 METP08581 1390 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 ARHGAP4P98171 946 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 DPYDQ12882 1025 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 EPAS1Q99814 870 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
SCARB2-209ENST00000638409 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-209ENST00000638409 PRIMPOLQ96LW4 560 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 PTPRUQ92729 1446 aa10.24□□□□□ -0.77
SCARB2-209ENST00000638409 BMS1Q14692 1282 aaKnown RBP10.23□□□□□ -0.77
SCARB2-209ENST00000638409 EVI5LQ96CN4 794 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
SCARB2-209ENST00000638409 FDX1P10109 184 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 CAPN12Q6ZSI9 719 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 ANKMY2Q8IV38 441 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 CHPF2Q9P2E5 772 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 ASXL1Q8IXJ9 1541 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 TONSLQ96HA7 1378 aa10.23□□□□□ -0.77
SCARB2-209ENST00000638409 FANCCQ00597 558 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 SEPT3Q9UH03 358 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 FAN1Q9Y2M0 1017 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 ADGRB1O14514 1584 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 NCOA3Q9Y6Q9 1424 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 PER1O15534 1290 aaPredicted RBP10.22□□□□□ -0.77
SCARB2-209ENST00000638409 FBXO45P0C2W1 286 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 PRKAR2AP13861 404 aaKnown RBP10.22□□□□□ -0.77
SCARB2-209ENST00000638409 DIEXFQ68CQ4 756 aaKnown RBP10.22□□□□□ -0.77
SCARB2-209ENST00000638409 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
SCARB2-209ENST00000638409 ANAPC15P60006 121 aa10.21□□□□□ -0.77
SCARB2-209ENST00000638409 LARP1Q6PKG0 1096 aaKnown RBP10.21□□□□□ -0.77
SCARB2-209ENST00000638409 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.77
SCARB2-209ENST00000638409 TECPR2O15040 1411 aa10.21□□□□□ -0.77
SCARB2-209ENST00000638409 APBB1IPQ7Z5R6 666 aaPredicted RBP10.21□□□□□ -0.78
SCARB2-209ENST00000638409 G3BP2Q9UN86 482 aaKnown RBP10.21□□□□□ -0.78
SCARB2-209ENST00000638409 PTCH1Q13635 1447 aa10.21□□□□□ -0.78
SCARB2-209ENST00000638409 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
SCARB2-209ENST00000638409 CENPBP07199 599 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-209ENST00000638409 MS4A3Q96HJ5 214 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms