RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 SRP68Q9UHB9 627 aaKnown RBP16.58■□□□□ 0.24
GFAP-227ENST00000638400 ZBTB1Q9Y2K1 713 aa16.58■□□□□ 0.24
GFAP-227ENST00000638400 COL15A1P39059 1388 aa16.58■□□□□ 0.24
GFAP-227ENST00000638400 SIPA1L3O60292 1781 aaPredicted RBP16.57■□□□□ 0.24
GFAP-227ENST00000638400 YY1P25490 414 aa16.57■□□□□ 0.24
GFAP-227ENST00000638400 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
GFAP-227ENST00000638400 MYH14Q7Z406 1995 aaKnown RBP16.57■□□□□ 0.24
GFAP-227ENST00000638400 KCNQ3O43525 872 aa16.56■□□□□ 0.24
GFAP-227ENST00000638400 ZPR1O75312 459 aa16.56■□□□□ 0.24
GFAP-227ENST00000638400 UTRNP46939 3433 aa16.56■□□□□ 0.24
GFAP-227ENST00000638400 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
GFAP-227ENST00000638400 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
GFAP-227ENST00000638400 CANXP27824 592 aaKnown RBP16.55■□□□□ 0.24
GFAP-227ENST00000638400 FKBP8Q14318 412 aa16.55■□□□□ 0.24
GFAP-227ENST00000638400 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
GFAP-227ENST00000638400 TAF7Q15545 349 aaPredicted RBP16.55■□□□□ 0.24
GFAP-227ENST00000638400 PARP3Q9Y6F1 533 aa16.55■□□□□ 0.24
GFAP-227ENST00000638400 C10orf71Q711Q0 1435 aa16.54■□□□□ 0.24
GFAP-227ENST00000638400 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
GFAP-227ENST00000638400 NARFQ9UHQ1 456 aa16.54■□□□□ 0.24
GFAP-227ENST00000638400 A0A087WZG4 1122 aa16.53■□□□□ 0.24
GFAP-227ENST00000638400 EIF5P55010 431 aaKnown RBP16.53■□□□□ 0.24
GFAP-227ENST00000638400 PNISRQ8TF01 805 aaKnown RBP16.53■□□□□ 0.24
GFAP-227ENST00000638400 GOLGB1Q14789 3259 aaKnown RBP16.53■□□□□ 0.24
GFAP-227ENST00000638400 CCER2I3L3R5 266 aa16.52■□□□□ 0.24
GFAP-227ENST00000638400 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
GFAP-227ENST00000638400 SNRPA1P09661 255 aaKnown RBP16.52■□□□□ 0.24
GFAP-227ENST00000638400 YBX3P16989 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
GFAP-227ENST00000638400 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
GFAP-227ENST00000638400 DDR1Q08345 913 aa16.51■□□□□ 0.23
GFAP-227ENST00000638400 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
GFAP-227ENST00000638400 THUMPD2Q9BTF0 503 aaKnown RBP16.51■□□□□ 0.23
GFAP-227ENST00000638400 PXDNLA1KZ92 1463 aa16.5■□□□□ 0.23
GFAP-227ENST00000638400 RIPK4P57078 832 aa16.5■□□□□ 0.23
GFAP-227ENST00000638400 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
GFAP-227ENST00000638400 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
GFAP-227ENST00000638400 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
GFAP-227ENST00000638400 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
GFAP-227ENST00000638400 A1BGP04217 495 aa16.49■□□□□ 0.23
GFAP-227ENST00000638400 TM4SF1P30408 202 aa16.49■□□□□ 0.23
GFAP-227ENST00000638400 TMPOP42166 694 aaKnown RBP16.49■□□□□ 0.23
GFAP-227ENST00000638400 TGFB2P61812 414 aa16.49■□□□□ 0.23
GFAP-227ENST00000638400 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
GFAP-227ENST00000638400 USP16Q9Y5T5 823 aa16.49■□□□□ 0.23
GFAP-227ENST00000638400 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
GFAP-227ENST00000638400 RUNDC1Q96C34 613 aa16.48■□□□□ 0.23
GFAP-227ENST00000638400 BCL2L12Q9HB09 334 aa16.48■□□□□ 0.23
GFAP-227ENST00000638400 NFIXQ14938 502 aa16.47■□□□□ 0.23
GFAP-227ENST00000638400 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
GFAP-227ENST00000638400 WWC3Q9ULE0 1092 aa16.46■□□□□ 0.23
GFAP-227ENST00000638400 TBC1D2BQ9UPU7 963 aa16.46■□□□□ 0.23
GFAP-227ENST00000638400 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
GFAP-227ENST00000638400 A0A0G2JLW4 131 aa16.45■□□□□ 0.22
GFAP-227ENST00000638400 EIF4A1P60842 406 aaKnown RBP16.45■□□□□ 0.22
GFAP-227ENST00000638400 SCN7AQ01118 1682 aa16.44■□□□□ 0.22
GFAP-227ENST00000638400 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
GFAP-227ENST00000638400 CAMTA2O94983 1202 aa16.44■□□□□ 0.22
GFAP-227ENST00000638400 DPEP1P16444 411 aa16.44■□□□□ 0.22
GFAP-227ENST00000638400 PIP4K2AP48426 406 aaPredicted RBP16.44■□□□□ 0.22
GFAP-227ENST00000638400 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
GFAP-227ENST00000638400 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
GFAP-227ENST00000638400 TSPYL4Q9UJ04 414 aa16.44■□□□□ 0.22
GFAP-227ENST00000638400 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
GFAP-227ENST00000638400 KDM3BQ7LBC6 1761 aa16.43■□□□□ 0.22
GFAP-227ENST00000638400 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
GFAP-227ENST00000638400 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
GFAP-227ENST00000638400 SERPINB2P05120 415 aa16.43■□□□□ 0.22
GFAP-227ENST00000638400 NEUROD2Q15784 382 aa16.43■□□□□ 0.22
GFAP-227ENST00000638400 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
GFAP-227ENST00000638400 BICDL1Q6ZP65 573 aa16.43■□□□□ 0.22
GFAP-227ENST00000638400 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
GFAP-227ENST00000638400 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
GFAP-227ENST00000638400 TBC1D9BQ66K14 1250 aa16.42■□□□□ 0.22
GFAP-227ENST00000638400 KIAA1551Q9HCM1 1747 aa16.42■□□□□ 0.22
GFAP-227ENST00000638400 ZNF784Q8NCA9 323 aaPredicted RBP16.41■□□□□ 0.22
GFAP-227ENST00000638400 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
GFAP-227ENST00000638400 BCS1LQ9Y276 419 aa16.41■□□□□ 0.22
GFAP-227ENST00000638400 ZNF652Q9Y2D9 606 aa16.41■□□□□ 0.22
GFAP-227ENST00000638400 RGL2O15211 777 aa16.4■□□□□ 0.22
GFAP-227ENST00000638400 KCNA3P22001 575 aa16.4■□□□□ 0.22
GFAP-227ENST00000638400 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
GFAP-227ENST00000638400 LAMB4A4D0S4 1761 aa16.39■□□□□ 0.21
GFAP-227ENST00000638400 ANP32CO43423 234 aa16.39■□□□□ 0.21
GFAP-227ENST00000638400 CHRNA5P30532 468 aa16.39■□□□□ 0.21
GFAP-227ENST00000638400 CLEC4GQ6UXB4 293 aa16.39■□□□□ 0.21
GFAP-227ENST00000638400 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
GFAP-227ENST00000638400 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
GFAP-227ENST00000638400 DALRD3Q5D0E6 543 aaKnown RBP16.38■□□□□ 0.21
GFAP-227ENST00000638400 NRXN2Q9P2S2 1712 aa16.38■□□□□ 0.21
GFAP-227ENST00000638400 CHL1O00533 1208 aa16.37■□□□□ 0.21
GFAP-227ENST00000638400 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
GFAP-227ENST00000638400 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
GFAP-227ENST00000638400 BCORQ6W2J9 1755 aa16.36■□□□□ 0.21
GFAP-227ENST00000638400 APAF1O14727 1248 aa16.36■□□□□ 0.21
GFAP-227ENST00000638400 NPHP1O15259 732 aa16.36■□□□□ 0.21
GFAP-227ENST00000638400 CCDC184Q52MB2 194 aa16.36■□□□□ 0.21
GFAP-227ENST00000638400 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
GFAP-227ENST00000638400 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
GFAP-227ENST00000638400 CHD4Q14839 1912 aa16.35■□□□□ 0.21
GFAP-227ENST00000638400 MYL6BP14649 208 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms