RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 CANXP27824 592 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-249ENST00000637777 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
CACNA1A-249ENST00000637777 SYT17Q9BSW7 474 aa18.95■□□□□ 0.62
CACNA1A-249ENST00000637777 TEX13AQ9BXU3 409 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-249ENST00000637777 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
CACNA1A-249ENST00000637777 COL24A1Q17RW2 1714 aa18.94■□□□□ 0.62
CACNA1A-249ENST00000637777 TMPOP42166 694 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-249ENST00000637777 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-249ENST00000637777 PNISRQ8TF01 805 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-249ENST00000637777 ZBTB1Q9Y2K1 713 aa18.94■□□□□ 0.62
CACNA1A-249ENST00000637777 ZPR1O75312 459 aa18.93■□□□□ 0.62
CACNA1A-249ENST00000637777 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
CACNA1A-249ENST00000637777 PELP1Q8IZL8 1130 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-249ENST00000637777 COL15A1P39059 1388 aa18.92■□□□□ 0.62
CACNA1A-249ENST00000637777 MMP10P09238 476 aa18.91■□□□□ 0.62
CACNA1A-249ENST00000637777 NLGN1Q8N2Q7 840 aa18.91■□□□□ 0.62
CACNA1A-249ENST00000637777 SRP68Q9UHB9 627 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-249ENST00000637777 SOS1Q07889 1333 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-249ENST00000637777 SNRPA1P09661 255 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-249ENST00000637777 TSPYL4Q9UJ04 414 aa18.9■□□□□ 0.62
CACNA1A-249ENST00000637777 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-249ENST00000637777 KDM3BQ7LBC6 1761 aa18.89■□□□□ 0.61
CACNA1A-249ENST00000637777 PARP3Q9Y6F1 533 aa18.89■□□□□ 0.61
CACNA1A-249ENST00000637777 GYS1P13807 737 aa18.88■□□□□ 0.61
CACNA1A-249ENST00000637777 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
CACNA1A-249ENST00000637777 USP42Q9H9J4 1324 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-249ENST00000637777 A0A087WZG4 1122 aa18.87■□□□□ 0.61
CACNA1A-249ENST00000637777 PRAMEF22A3QJZ6 481 aa18.87■□□□□ 0.61
CACNA1A-249ENST00000637777 A1BGP04217 495 aa18.87■□□□□ 0.61
CACNA1A-249ENST00000637777 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
CACNA1A-249ENST00000637777 PIP4K2AP48426 406 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-249ENST00000637777 GPR162Q16538 588 aa18.86■□□□□ 0.61
CACNA1A-249ENST00000637777 NLGN2Q8NFZ4 835 aa18.86■□□□□ 0.61
CACNA1A-249ENST00000637777 USP16Q9Y5T5 823 aa18.86■□□□□ 0.61
CACNA1A-249ENST00000637777 APAF1O14727 1248 aa18.85■□□□□ 0.61
CACNA1A-249ENST00000637777 FKBP8Q14318 412 aa18.85■□□□□ 0.61
CACNA1A-249ENST00000637777 LAMB4A4D0S4 1761 aa18.85■□□□□ 0.61
CACNA1A-249ENST00000637777 NARFQ9UHQ1 456 aa18.84■□□□□ 0.61
CACNA1A-249ENST00000637777 CD2APQ9Y5K6 639 aa18.84■□□□□ 0.61
CACNA1A-249ENST00000637777 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.6
CACNA1A-249ENST00000637777 TBC1D2BQ9UPU7 963 aa18.83■□□□□ 0.6
CACNA1A-249ENST00000637777 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
CACNA1A-249ENST00000637777 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-249ENST00000637777 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-249ENST00000637777 BICDL1Q6ZP65 573 aa18.82■□□□□ 0.6
CACNA1A-249ENST00000637777 WWC3Q9ULE0 1092 aa18.82■□□□□ 0.6
CACNA1A-249ENST00000637777 NPHP1O15259 732 aa18.81■□□□□ 0.6
CACNA1A-249ENST00000637777 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
CACNA1A-249ENST00000637777 GIGYF1O75420 1035 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-249ENST00000637777 DZIP3Q86Y13 1208 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-249ENST00000637777 NGEFQ8N5V2 710 aa18.8■□□□□ 0.6
CACNA1A-249ENST00000637777 SCN7AQ01118 1682 aa18.79■□□□□ 0.6
CACNA1A-249ENST00000637777 EIF2S2P20042 333 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-249ENST00000637777 CALD1Q05682 793 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-249ENST00000637777 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
CACNA1A-249ENST00000637777 BABAM1Q9NWV8 329 aa18.78■□□□□ 0.6
CACNA1A-249ENST00000637777 MYL6BP14649 208 aa18.77■□□□□ 0.6
CACNA1A-249ENST00000637777 DDR1Q08345 913 aa18.77■□□□□ 0.6
CACNA1A-249ENST00000637777 NFIXQ14938 502 aa18.77■□□□□ 0.6
CACNA1A-249ENST00000637777 ZNF652Q9Y2D9 606 aa18.77■□□□□ 0.6
CACNA1A-249ENST00000637777 POLRMTO00411 1230 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-249ENST00000637777 NECTIN2Q92692 538 aa18.76■□□□□ 0.59
CACNA1A-249ENST00000637777 N4BP2Q86UW6 1770 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-249ENST00000637777 C10orf71Q711Q0 1435 aa18.75■□□□□ 0.59
CACNA1A-249ENST00000637777 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
CACNA1A-249ENST00000637777 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
CACNA1A-249ENST00000637777 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-249ENST00000637777 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
CACNA1A-249ENST00000637777 AFDNP55196 1824 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 NBPF26B4DH59 902 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 CHL1O00533 1208 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 SERPINB2P05120 415 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 TM4SF1P30408 202 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 TBC1D9BQ66K14 1250 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 NBPF10Q6P3W6 841 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 NBPF15Q8N660 670 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 KIF13BQ9NQT8 1826 aa18.74■□□□□ 0.59
CACNA1A-249ENST00000637777 CAMTA2O94983 1202 aa18.73■□□□□ 0.59
CACNA1A-249ENST00000637777 YY1P25490 414 aa18.73■□□□□ 0.59
CACNA1A-249ENST00000637777 GNAI1P63096 354 aa18.73■□□□□ 0.59
CACNA1A-249ENST00000637777 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
CACNA1A-249ENST00000637777 CARMIL3Q8ND23 1372 aa18.72■□□□□ 0.59
CACNA1A-249ENST00000637777 A0A0G2JLW4 131 aa18.72■□□□□ 0.59
CACNA1A-249ENST00000637777 GRIN3BO60391 1043 aa18.72■□□□□ 0.59
CACNA1A-249ENST00000637777 TGFB2P61812 414 aa18.72■□□□□ 0.59
CACNA1A-249ENST00000637777 KRT24Q2M2I5 525 aa18.72■□□□□ 0.59
CACNA1A-249ENST00000637777 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
CACNA1A-249ENST00000637777 PXDNLA1KZ92 1463 aa18.71■□□□□ 0.59
CACNA1A-249ENST00000637777 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-249ENST00000637777 CHD4Q14839 1912 aa18.71■□□□□ 0.59
CACNA1A-249ENST00000637777 YBX3P16989 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
CACNA1A-249ENST00000637777 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
CACNA1A-249ENST00000637777 ERBB4Q15303 1308 aa18.71■□□□□ 0.59
CACNA1A-249ENST00000637777 UTRNP46939 3433 aa18.71■□□□□ 0.59
CACNA1A-249ENST00000637777 DPEP1P16444 411 aa18.7■□□□□ 0.58
CACNA1A-249ENST00000637777 BCS1LQ9Y276 419 aa18.7■□□□□ 0.58
CACNA1A-249ENST00000637777 FAM177BA6PVY3 158 aa18.69■□□□□ 0.58
CACNA1A-249ENST00000637777 ANXA1P04083 346 aa18.69■□□□□ 0.58
CACNA1A-249ENST00000637777 ST5P78524 1137 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms