RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 ALDH1L2Q3SY69 923 aa16.22■□□□□ 0.19
CNTNAP2-220ENST00000637555 SSH1Q8WYL5 1049 aa16.22■□□□□ 0.19
CNTNAP2-220ENST00000637555 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
CNTNAP2-220ENST00000637555 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
CNTNAP2-220ENST00000637555 C8orf34Q49A92 452 aa16.21■□□□□ 0.19
CNTNAP2-220ENST00000637555 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
CNTNAP2-220ENST00000637555 TNNQ9UQP3 1299 aa16.21■□□□□ 0.19
CNTNAP2-220ENST00000637555 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
CNTNAP2-220ENST00000637555 RREB1Q92766 1687 aa16.2■□□□□ 0.18
CNTNAP2-220ENST00000637555 TAF1LQ8IZX4 1826 aa16.2■□□□□ 0.18
CNTNAP2-220ENST00000637555 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
CNTNAP2-220ENST00000637555 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
CNTNAP2-220ENST00000637555 COG6Q9Y2V7 657 aa16.2■□□□□ 0.18
CNTNAP2-220ENST00000637555 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
CNTNAP2-220ENST00000637555 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
CNTNAP2-220ENST00000637555 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
CNTNAP2-220ENST00000637555 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
CNTNAP2-220ENST00000637555 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
CNTNAP2-220ENST00000637555 FRAT1Q92837 279 aaPredicted RBP16.18■□□□□ 0.18
CNTNAP2-220ENST00000637555 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
CNTNAP2-220ENST00000637555 SLC4A3P48751 1232 aa16.17■□□□□ 0.18
CNTNAP2-220ENST00000637555 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
CNTNAP2-220ENST00000637555 RLBP1P12271 317 aa16.17■□□□□ 0.18
CNTNAP2-220ENST00000637555 PDE3AQ14432 1141 aa16.17■□□□□ 0.18
CNTNAP2-220ENST00000637555 FAM196AQ6ZSG2 479 aa16.17■□□□□ 0.18
CNTNAP2-220ENST00000637555 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
CNTNAP2-220ENST00000637555 RGPD3A6NKT7 1758 aaPredicted RBP16.16■□□□□ 0.18
CNTNAP2-220ENST00000637555 RGPD4Q7Z3J3 1758 aa16.16■□□□□ 0.18
CNTNAP2-220ENST00000637555 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
CNTNAP2-220ENST00000637555 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
CNTNAP2-220ENST00000637555 HDGFL1Q5TGJ6 251 aa16.16■□□□□ 0.18
CNTNAP2-220ENST00000637555 PALLDQ8WX93 1383 aa16.16■□□□□ 0.18
CNTNAP2-220ENST00000637555 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
CNTNAP2-220ENST00000637555 VSIG10Q8N0Z9 540 aa16.15■□□□□ 0.18
CNTNAP2-220ENST00000637555 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
CNTNAP2-220ENST00000637555 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.18
CNTNAP2-220ENST00000637555 NECTIN2Q92692 538 aa16.14■□□□□ 0.18
CNTNAP2-220ENST00000637555 USP16Q9Y5T5 823 aa16.14■□□□□ 0.18
CNTNAP2-220ENST00000637555 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
CNTNAP2-220ENST00000637555 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
CNTNAP2-220ENST00000637555 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
CNTNAP2-220ENST00000637555 SMARCC1Q92922 1105 aaPredicted RBP16.13■□□□□ 0.17
CNTNAP2-220ENST00000637555 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
CNTNAP2-220ENST00000637555 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
CNTNAP2-220ENST00000637555 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
CNTNAP2-220ENST00000637555 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
CNTNAP2-220ENST00000637555 CHPF2Q9P2E5 772 aa16.12■□□□□ 0.17
CNTNAP2-220ENST00000637555 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
CNTNAP2-220ENST00000637555 PDIA6Q15084 440 aa16.12■□□□□ 0.17
CNTNAP2-220ENST00000637555 G2E3Q7L622 706 aa16.12■□□□□ 0.17
CNTNAP2-220ENST00000637555 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
CNTNAP2-220ENST00000637555 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
CNTNAP2-220ENST00000637555 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
CNTNAP2-220ENST00000637555 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
CNTNAP2-220ENST00000637555 PCDHB15Q9Y5E8 787 aa16.11■□□□□ 0.17
CNTNAP2-220ENST00000637555 EP400Q96L91 3159 aa16.11■□□□□ 0.17
CNTNAP2-220ENST00000637555 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
CNTNAP2-220ENST00000637555 LOC102724428A0A0B4J2F2 783 aa16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 SIK1P57059 783 aa16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 TRIM37O94972 964 aa16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP2-220ENST00000637555 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
CNTNAP2-220ENST00000637555 TRIM27P14373 513 aa16.09■□□□□ 0.17
CNTNAP2-220ENST00000637555 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
CNTNAP2-220ENST00000637555 ANXA1P04083 346 aa16.08■□□□□ 0.17
CNTNAP2-220ENST00000637555 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.17
CNTNAP2-220ENST00000637555 ITPK1Q13572 414 aa16.08■□□□□ 0.17
CNTNAP2-220ENST00000637555 ATF7IPQ6VMQ6 1270 aa16.08■□□□□ 0.17
CNTNAP2-220ENST00000637555 C4BP0C0L5 1744 aa16.08■□□□□ 0.17
CNTNAP2-220ENST00000637555 PTPRCP08575 1304 aa16.08■□□□□ 0.16
CNTNAP2-220ENST00000637555 NBPF26B4DH59 902 aa16.08■□□□□ 0.16
CNTNAP2-220ENST00000637555 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
CNTNAP2-220ENST00000637555 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.16
CNTNAP2-220ENST00000637555 NBPF15Q8N660 670 aa16.08■□□□□ 0.16
CNTNAP2-220ENST00000637555 PHAXQ9H814 394 aaKnown RBP16.08■□□□□ 0.16
CNTNAP2-220ENST00000637555 SEC24BO95487 1268 aa16.07■□□□□ 0.16
CNTNAP2-220ENST00000637555 IPO8O15397 1037 aaKnown RBP16.07■□□□□ 0.16
CNTNAP2-220ENST00000637555 A1BGP04217 495 aa16.07■□□□□ 0.16
CNTNAP2-220ENST00000637555 FLIIQ13045 1269 aa16.07■□□□□ 0.16
CNTNAP2-220ENST00000637555 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
CNTNAP2-220ENST00000637555 ANKRD36CQ5JPF3 1778 aa16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 ABCC4O15439 1325 aa16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 AFDNP55196 1824 aaKnown RBP16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 PXDNLA1KZ92 1463 aa16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP2-220ENST00000637555 STARD3NLO95772 234 aa16.05■□□□□ 0.16
CNTNAP2-220ENST00000637555 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
CNTNAP2-220ENST00000637555 API5Q9BZZ5 524 aaKnown RBP16.05■□□□□ 0.16
CNTNAP2-220ENST00000637555 NUP98P52948 1817 aa16.05■□□□□ 0.16
CNTNAP2-220ENST00000637555 C4AP0C0L4 1744 aa16.04■□□□□ 0.16
CNTNAP2-220ENST00000637555 MYL6BP14649 208 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms