RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 TSG101Q99816 390 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 TAOK3Q9H2K8 898 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 OPA1O60313 960 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 CACNA2D4Q7Z3S7 1137 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 ZSCAN22P10073 491 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 CTAGE15A4D2H0 777 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 CTAGE8P0CG41 777 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 CTAGE6Q86UF2 777 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 CTAGE4Q8IX94 777 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 TMX1Q9H3N1 280 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 CNNM1Q9NRU3 951 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 CCDC186Q7Z3E2 898 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 CAPN2P17655 700 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 SPECC1Q5M775 1068 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 SPATA24Q86W54 205 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 MICALL1Q8N3F8 863 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
SMARCA2-258ENST00000637103 GOLGA1Q92805 767 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 RAB3GAP1Q15042 981 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 KLHL10Q6JEL2 608 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 A0A1B0GUL7 405 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 IGHDP01880 384 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 ZSCAN16Q9H4T2 348 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 GABPB1Q06547 395 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 HLTFQ14527 1009 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 TTC22Q5TAA0 569 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 NSRP1Q9H0G5 558 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-258ENST00000637103 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 CPLX3Q8WVH0 158 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 C6orf163Q5TEZ5 329 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 SMC5Q8IY18 1101 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 STAMBPO95630 424 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 DNAI1Q9UI46 699 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 EBAG9O00559 213 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 TUBBP07437 444 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 NLRP6P59044 892 aa13.05□□□□□ -0.32
SMARCA2-258ENST00000637103 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 MAP3K1Q13233 1512 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 PRIM1P49642 420 aaKnown RBP13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 FKBP4Q02790 459 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 DESP17661 470 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 CEP63Q96MT8 703 aa13.04□□□□□ -0.32
SMARCA2-258ENST00000637103 DAPK1P53355 1430 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 PIP4K2BP78356 416 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 NUCB1Q02818 461 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 USP48Q86UV5 1035 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 FAM114A1Q8IWE2 563 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 RRAGDQ9NQL2 400 aaPredicted RBP13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 LIG1P18858 919 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 TDO2P48775 406 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 GSTTP1A0A1W2PQM5 241 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 SSBP05455 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 TRIM27P14373 513 aa13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 TTC12Q9H892 705 aaPredicted RBP13.03□□□□□ -0.32
SMARCA2-258ENST00000637103 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.32
SMARCA2-258ENST00000637103 MCM6Q14566 821 aa13.02□□□□□ -0.32
SMARCA2-258ENST00000637103 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.32
SMARCA2-258ENST00000637103 ANAPC15P60006 121 aa13.02□□□□□ -0.32
SMARCA2-258ENST00000637103 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.32
SMARCA2-258ENST00000637103 JADE2Q9NQC1 790 aa13.02□□□□□ -0.32
SMARCA2-258ENST00000637103 GOLIM4O00461 696 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 UBASH3AP57075 661 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 CCDC121Q6ZUS5 278 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 NLRP2Q9NX02 1062 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 TFIP11Q9UBB9 837 aaKnown RBP13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 NAIPQ13075 1403 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 CEP126Q9P2H0 1117 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.33
SMARCA2-258ENST00000637103 GBP6Q6ZN66 633 aa13.01□□□□□ -0.33
SMARCA2-258ENST00000637103 HMG20BQ9P0W2 317 aa13.01□□□□□ -0.33
SMARCA2-258ENST00000637103 PTPRCP08575 1304 aa13.01□□□□□ -0.33
SMARCA2-258ENST00000637103 TDRD12Q587J7 1177 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms