RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	GGNBP2	Q9H3C7	697 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	ARHGEF5	Q12774	1597 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	SHPRH	Q149N8	1683 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	SKIL	P12757	684 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	PDE1A	P54750	535 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	GNAI1	P63096	354 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	CTR9	Q6PD62	1173 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	TMCO3	Q6UWJ1	677 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	LRRFIP2	Q9Y608	721 aa	Known RBP	6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	ADAMTS12	P58397	1594 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	RGS12	O14924	1447 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	TRAPPC8	Q9Y2L5	1435 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	ZNF165	P49910	485 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	ERCC6L	Q2NKX8	1250 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	SYT10	Q6XYQ8	523 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	FILIP1	Q7Z7B0	1213 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	CCDC191	Q8NCU4	936 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	SPDYE1	Q8NFV5	336 aa	Predicted RBP	6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	CBX8	Q9HC52	389 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	ADGRF5	Q8IZF2	1346 aa		6.36	□□□□□ -1.39
RYR3-223	ENST00000636845	KIF2A	O00139	706 aa	Predicted RBP	6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	NEMF	O60524	1076 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	PRKAR2B	P31323	418 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	TSHZ3	Q63HK5	1081 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	CHMP7	Q8WUX9	453 aa	Predicted RBP	6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	CHMP4C	Q96CF2	233 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	LARP6	Q9BRS8	491 aa	Known RBP	6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	YY1AP1	Q9H869	796 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	MRVI1	Q9Y6F6	885 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	RTL1	A6NKG5	1358 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	PIK3R4	Q99570	1358 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	CEP152	O94986	1710 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	MYO1C	O00159	1063 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	PNMA6A	P0CW24	399 aa	Predicted RBP	6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	ZSCAN26	Q16670	478 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	CEP85	Q6P2H3	762 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	KCNV2	Q8TDN2	545 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	UBXN4	Q92575	508 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	FAM53C	Q9NYF3	392 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	NSD2	O96028	1365 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	PTCH1	Q13635	1447 aa		6.35	□□□□□ -1.39
RYR3-223	ENST00000636845	USP27X	A6NNY8	438 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	DHX16	O60231	1041 aa	Known RBP	6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	CASQ1	P31415	396 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	KRT85	P78386	507 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	ARHGAP29	Q52LW3	1261 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	NOM1	Q5C9Z4	860 aa	Known RBP	6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	LRRC8A	Q8IWT6	810 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	ZNF446	Q9NWS9	450 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	SBNO2	Q9Y2G9	1366 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	DUOX2	Q9NRD8	1548 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	UNC13B	O14795	1591 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	BECN2	A8MW95	431 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	TRIM66	O15016	1216 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	NRDC	O43847	1150 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	FCHSD2	O94868	740 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	GORAB	Q5T7V8	394 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	TMCO4	Q5TGY1	634 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	MNS1	Q8NEH6	495 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	RAD50	Q92878	1312 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	JPH4	Q96JJ6	628 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	AK7	Q96M32	723 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	DACT1	Q9NYF0	836 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	YEATS2	Q9ULM3	1422 aa		6.34	□□□□□ -1.39
RYR3-223	ENST00000636845	IQGAP3	Q86VI3	1631 aa		6.34	□□□□□ -1.4
RYR3-223	ENST00000636845	SNW1	Q13573	536 aa	Known RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CCDC144B	Q3MJ40	725 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	MUM1L1	Q5H9M0	696 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	ICE2	Q659A1	982 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	PLA2G4D	Q86XP0	818 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	HOMER1	Q86YM7	354 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CCDC144CP	Q8IYA2	1237 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	BICD2	Q8TD16	824 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	DNAJC25	Q9H1X3	360 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	TOMM22	Q9NS69	142 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	MBIP	Q9NS73	344 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	LIMCH1	Q9UPQ0	1083 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	HDAC5	Q9UQL6	1122 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	FHOD1	Q9Y613	1164 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	UHRF1BP1L	A0JNW5	1464 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	ATP10B	O94823	1461 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	EVC2	Q86UK5	1308 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	LOC102724159	A0A0B4J2E5	919 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CCDC69	A6NI79	296 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CHRM1	P11229	460 aa	Predicted RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CHML	P26374	656 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	GJB2	P29033	226 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	FXR2	P51116	673 aa	Known RBP eCLIP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	PWP2	Q15269	919 aa	Known RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	NYAP1	Q6ZVC0	841 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CLTCL1	P53675	1640 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	ADGRB2	O60241	1585 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	MAST1	Q9Y2H9	1570 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	SYCP2	Q9BX26	1530 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	HMOX1	P09601	288 aa		6.33	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms