RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SHANK3Q9BYB0 1731 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 EVA1CP58658 441 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 WDR43Q15061 677 aaKnown RBP eCLIP8.94□□□□□ -0.98
UPF3B-205ENST00000636792 BARGINQ6ZT62 677 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 NGEFQ8N5V2 710 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 MRS2Q9HD23 443 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 USP21Q9UK80 565 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 SPATA31A1Q5TZJ5 1347 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 SPATA31A5Q5VU36 1347 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 SPATA31A7Q8IWB4 1347 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 OVOS2A0A0G2JMS6 1433 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 TNS2Q63HR2 1409 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 ADAMTS7Q9UKP4 1686 aa8.94□□□□□ -0.98
UPF3B-205ENST00000636792 FCHSD2O94868 740 aa8.93□□□□□ -0.98
UPF3B-205ENST00000636792 NEFMP07197 916 aa8.93□□□□□ -0.98
UPF3B-205ENST00000636792 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
UPF3B-205ENST00000636792 Q6ZNB5 142 aa8.93□□□□□ -0.98
UPF3B-205ENST00000636792 NYAP1Q6ZVC0 841 aa8.93□□□□□ -0.98
UPF3B-205ENST00000636792 VIRMAQ69YN4 1812 aaKnown RBP8.93□□□□□ -0.98
UPF3B-205ENST00000636792 ZBTB7CA1YPR0 619 aa8.92□□□□□ -0.98
UPF3B-205ENST00000636792 FBLN1P23142 703 aa8.92□□□□□ -0.98
UPF3B-205ENST00000636792 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
UPF3B-205ENST00000636792 TOM1L2Q6ZVM7 507 aa8.92□□□□□ -0.98
UPF3B-205ENST00000636792 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
UPF3B-205ENST00000636792 TCP11L2Q8N4U5 519 aa8.92□□□□□ -0.98
UPF3B-205ENST00000636792 EYA1Q99502 592 aa8.92□□□□□ -0.98
UPF3B-205ENST00000636792 DLG5Q8TDM6 1919 aa8.92□□□□□ -0.98
UPF3B-205ENST00000636792 SOCS7O14512 581 aa8.91□□□□□ -0.98
UPF3B-205ENST00000636792 CNGB1Q14028 1251 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-205ENST00000636792 PNISRQ8TF01 805 aaKnown RBP8.91□□□□□ -0.98
UPF3B-205ENST00000636792 RAPGEF4Q8WZA2 1011 aa8.91□□□□□ -0.98
UPF3B-205ENST00000636792 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
UPF3B-205ENST00000636792 STRN4Q9NRL3 753 aa8.91□□□□□ -0.98
UPF3B-205ENST00000636792 MEGF6O75095 1541 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 BCL9O00512 1426 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 U2AF1L5P0DN76 240 aaPredicted RBP8.9□□□□□ -0.98
UPF3B-205ENST00000636792 IL2RBP14784 551 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 TATP17735 454 aaPredicted RBP8.9□□□□□ -0.98
UPF3B-205ENST00000636792 RBM6P78332 1123 aaKnown RBP8.9□□□□□ -0.98
UPF3B-205ENST00000636792 U2AF1Q01081 240 aaKnown RBP eCLIP8.9□□□□□ -0.98
UPF3B-205ENST00000636792 AMOTQ4VCS5 1084 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 NBPF6Q5VWK0 638 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
UPF3B-205ENST00000636792 FBXW7Q969H0 707 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 GJD4Q96KN9 370 aaPredicted RBP8.9□□□□□ -0.98
UPF3B-205ENST00000636792 NBPF4Q96M43 638 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
UPF3B-205ENST00000636792 NLRP2Q9NX02 1062 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 SCN11AQ9UI33 1791 aa8.9□□□□□ -0.98
UPF3B-205ENST00000636792 PCDH11XQ9BZA7 1347 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 PCDH11YQ9BZA8 1340 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 MAPK8IP3Q9UPT6 1336 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 SOWAHBA6NEL2 793 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 U2SURPO15042 1029 aaKnown RBP8.89□□□□□ -0.99
UPF3B-205ENST00000636792 ONECUT3O60422 494 aaPredicted RBP8.89□□□□□ -0.99
UPF3B-205ENST00000636792 BCAMP50895 628 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 PROX2Q3B8N5 592 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 GAS2L2Q8NHY3 880 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 RSPH6AQ9H0K4 717 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 MRC1P22897 1456 aa8.89□□□□□ -0.99
UPF3B-205ENST00000636792 KCNC4Q03721 635 aa8.88□□□□□ -0.99
UPF3B-205ENST00000636792 SULT6B1Q6IMI4 303 aa8.88□□□□□ -0.99
UPF3B-205ENST00000636792 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
UPF3B-205ENST00000636792 RUNDC1Q96C34 613 aa8.88□□□□□ -0.99
UPF3B-205ENST00000636792 LTV1Q96GA3 475 aaPredicted RBP8.88□□□□□ -0.99
UPF3B-205ENST00000636792 SPG7Q9UQ90 795 aa8.88□□□□□ -0.99
UPF3B-205ENST00000636792 PCDHGA10Q9Y5H3 936 aa8.88□□□□□ -0.99
UPF3B-205ENST00000636792 BRWD3Q6RI45 1802 aa8.88□□□□□ -0.99
UPF3B-205ENST00000636792 RGPD3A6NKT7 1758 aaPredicted RBP8.87□□□□□ -0.99
UPF3B-205ENST00000636792 SIPA1L3O60292 1781 aaPredicted RBP8.87□□□□□ -0.99
UPF3B-205ENST00000636792 RGPD4Q7Z3J3 1758 aa8.87□□□□□ -0.99
UPF3B-205ENST00000636792 HSP90AB1P08238 724 aaKnown RBP8.87□□□□□ -0.99
UPF3B-205ENST00000636792 PRKAR2BP31323 418 aa8.87□□□□□ -0.99
UPF3B-205ENST00000636792 LMOD3Q0VAK6 560 aa8.87□□□□□ -0.99
UPF3B-205ENST00000636792 PLEKHO1Q53GL0 409 aaPredicted RBP8.87□□□□□ -0.99
UPF3B-205ENST00000636792 PLEKHF1Q96S99 279 aa8.87□□□□□ -0.99
UPF3B-205ENST00000636792 QTRT2Q9H974 415 aaKnown RBP8.87□□□□□ -0.99
UPF3B-205ENST00000636792 CCDC9Q9Y3X0 531 aaKnown RBP8.87□□□□□ -0.99
UPF3B-205ENST00000636792 DOT1LQ8TEK3 1739 aa8.87□□□□□ -0.99
UPF3B-205ENST00000636792 NHSQ6T4R5 1651 aa8.87□□□□□ -0.99
UPF3B-205ENST00000636792 SBF2Q86WG5 1849 aa8.87□□□□□ -0.99
UPF3B-205ENST00000636792 HTATSF1O43719 755 aaKnown RBP8.86□□□□□ -0.99
UPF3B-205ENST00000636792 COL9A1P20849 921 aa8.86□□□□□ -0.99
UPF3B-205ENST00000636792 LAPTM4AQ15012 233 aa8.86□□□□□ -0.99
UPF3B-205ENST00000636792 ZFRQ96KR1 1074 aaKnown RBP8.86□□□□□ -0.99
UPF3B-205ENST00000636792 ADAMTS8Q9UP79 889 aa8.86□□□□□ -0.99
UPF3B-205ENST00000636792 MAP3K5Q99683 1374 aa8.86□□□□□ -0.99
UPF3B-205ENST00000636792 ITGB4P16144 1822 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 CICQ96RK0 1608 aaPredicted RBP8.85□□□□□ -0.99
UPF3B-205ENST00000636792 PHF14O94880 888 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 RXRBP28702 533 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 CCDC27Q2M243 656 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 CCDC184Q52MB2 194 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 AKAP4Q5JQC9 854 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 KIAA1468Q9P260 1216 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 RGS12O14924 1447 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 ZNF831Q5JPB2 1677 aa8.85□□□□□ -0.99
UPF3B-205ENST00000636792 PAPPAQ13219 1627 aa8.84□□□□□ -0.99
UPF3B-205ENST00000636792 EXOC5O00471 708 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms