RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 NBR1Q14596 966 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 RUNDC1Q96C34 613 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 GCC1Q96CN9 775 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 KIAA0556O60303 1618 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 CPS1P31327 1500 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 SIK1P57059 783 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 DIAPH3Q9NSV4 1193 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 ADGRF5Q8IZF2 1346 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 NFATC2IPQ8NCF5 419 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 HTATIP2Q9BUP3 242 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 CWC25Q9NXE8 425 aaPredicted RBP8.37□□□□□ -1.07
CLN5-210ENST00000636520 ERVV-2B6SEH9 535 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 CNGA1P29973 690 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 PRKG1Q13976 671 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 COA7Q96BR5 231 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 UFL1O94874 794 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 EZH2Q15910 746 aaKnown RBP8.36□□□□□ -1.07
CLN5-210ENST00000636520 ALDH1A1P00352 501 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 CUL5Q93034 780 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 BRMS1Q9HCU9 246 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 PNMA3Q9UL41 463 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 ECM2O94769 699 aaPredicted RBP8.36□□□□□ -1.07
CLN5-210ENST00000636520 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 RSPH6AQ9H0K4 717 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 WDR17Q8IZU2 1322 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 CA12O43570 354 aa8.36□□□□□ -1.07
CLN5-210ENST00000636520 ATP7AQ04656 1500 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 SERPINB2P05120 415 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 AXDND1Q5T1B0 1012 aaPredicted RBP8.35□□□□□ -1.07
CLN5-210ENST00000636520 RAET1EQ8TD07 263 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 CCDC85AQ96PX6 553 aaPredicted RBP8.35□□□□□ -1.07
CLN5-210ENST00000636520 PPP4R2Q9NY27 417 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 CPLX1O14810 134 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 LDHAL6AQ6ZMR3 332 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 CCDC102AQ96A19 550 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 SH3TC1Q8TE82 1336 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 ZNF76P36508 570 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 ZNF444Q8N0Y2 327 aaPredicted RBP8.35□□□□□ -1.07
CLN5-210ENST00000636520 EFCAB6Q5THR3 1501 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 NCBP1Q09161 790 aaKnown RBP8.35□□□□□ -1.07
CLN5-210ENST00000636520 PLS1Q14651 629 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 CCDC136Q96JN2 1154 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 ARAP3Q8WWN8 1544 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 KDM5DQ9BY66 1539 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 NUP153P49790 1475 aaKnown RBP8.35□□□□□ -1.07
CLN5-210ENST00000636520 OVOS2A0A0G2JMS6 1433 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 OVOS2A0A0J9YW53 1432 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 OVOS2Q6IE36 1432 aa8.35□□□□□ -1.07
CLN5-210ENST00000636520 SYCP2Q9BX26 1530 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 LMNB1P20700 586 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 MAP3K12Q12852 859 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 CSPP1Q1MSJ5 1256 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 CD2APQ9Y5K6 639 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 FLT4P35916 1363 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 F8W031 263 aaPredicted RBP8.34□□□□□ -1.07
CLN5-210ENST00000636520 ZEB2O60315 1214 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 NPR1P16066 1061 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 TBC1D22AQ8WUA7 517 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
CLN5-210ENST00000636520 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 RNF20Q5VTR2 975 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 CHD1O14646 1710 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 SUPT6HQ7KZ85 1726 aaKnown RBP8.34□□□□□ -1.07
CLN5-210ENST00000636520 MASTLQ96GX5 879 aa8.34□□□□□ -1.07
CLN5-210ENST00000636520 OSBPP22059 807 aa8.34□□□□□ -1.08
CLN5-210ENST00000636520 KIAA2012Q0VF49 1180 aa8.34□□□□□ -1.08
CLN5-210ENST00000636520 POLR3AO14802 1390 aaPredicted RBP8.34□□□□□ -1.08
CLN5-210ENST00000636520 KIF28PB7ZC32 967 aa8.33□□□□□ -1.08
CLN5-210ENST00000636520 CTCFP49711 727 aaPredicted RBP8.33□□□□□ -1.08
CLN5-210ENST00000636520 ZNF157P51786 506 aaPredicted RBP8.33□□□□□ -1.08
CLN5-210ENST00000636520 RWDD1Q9H446 243 aaPredicted RBP8.33□□□□□ -1.08
CLN5-210ENST00000636520 FAM135BQ49AJ0 1406 aa8.33□□□□□ -1.08
CLN5-210ENST00000636520 CERS3Q8IU89 383 aa8.33□□□□□ -1.08
CLN5-210ENST00000636520 HUNKP57058 714 aa8.33□□□□□ -1.08
CLN5-210ENST00000636520 SAFBQ15424 915 aaKnown RBP eCLIP8.33□□□□□ -1.08
CLN5-210ENST00000636520 C9orf131Q5VYM1 1079 aa8.33□□□□□ -1.08
CLN5-210ENST00000636520 YTHDC2Q9H6S0 1430 aaKnown RBP8.33□□□□□ -1.08
CLN5-210ENST00000636520 TCOF1Q13428 1488 aaKnown RBP8.33□□□□□ -1.08
CLN5-210ENST00000636520 BBOX1O75936 387 aa8.32□□□□□ -1.08
CLN5-210ENST00000636520 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
CLN5-210ENST00000636520 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
CLN5-210ENST00000636520 TGFB2P61812 414 aa8.32□□□□□ -1.08
CLN5-210ENST00000636520 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
CLN5-210ENST00000636520 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
CLN5-210ENST00000636520 KIF16BQ96L93 1317 aa8.32□□□□□ -1.08
CLN5-210ENST00000636520 BLMP54132 1417 aaPredicted RBP8.31□□□□□ -1.08
CLN5-210ENST00000636520 GOLGA6L22H0YM25 854 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 TDO2P48775 406 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 MVPQ14764 893 aaKnown RBP8.31□□□□□ -1.08
CLN5-210ENST00000636520 MBIPQ9NS73 344 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 SETD1BQ9UPS6 1966 aaKnown RBP8.31□□□□□ -1.08
CLN5-210ENST00000636520 ABCC11Q96J66 1382 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
CLN5-210ENST00000636520 STK25O00506 426 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms