RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 ERBB3P21860 1342 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 PLEKHD1A6NEE1 506 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 HMGB1P1B2RPK0 211 aaPredicted RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 GIPC1O14908 333 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 FZD6O60353 706 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 DXOO77932 396 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 MZF1P28698 734 aaPredicted RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 GDF10P55107 478 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 DNM1Q05193 864 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 ENOX2Q16206 610 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 C8orf34Q49A92 452 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 ZNF394Q53GI3 561 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 NBPF6Q5VWK0 638 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 ZNF746Q6NUN9 644 aaPredicted RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 FILIP1Q7Z7B0 1213 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 PPARGC1BQ86YN6 1023 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 CCAR1Q8IX12 1150 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 DHX37Q8IY37 1157 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 TNS4Q8IZW8 715 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 PRPF38AQ8NAV1 312 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 ANKK1Q8NFD2 765 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 ZNF526Q8TF50 670 aaPredicted RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 NBPF4Q96M43 638 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 PURBQ96QR8 312 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 SRPK1Q96SB4 655 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 FAM129BQ96TA1 746 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 OCSTAMPQ9BR26 566 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 BRINP2Q9C0B6 783 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 SPC25Q9HBM1 224 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 NEUROD4Q9HD90 331 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 SCUBE2Q9NQ36 999 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 PPP4R2Q9NY27 417 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 PCDH10Q9P2E7 1040 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 SERTAD1Q9UHV2 236 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 DDX41Q9UJV9 622 aaKnown RBP2.44□□□□□ -2.02
GABRB3-220ENST00000636512 PPME1Q9Y570 386 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 EMILIN1Q9Y6C2 1016 aa2.44□□□□□ -2.02
GABRB3-220ENST00000636512 ESPNB1AK53 854 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 K7ELQ4 463 aaPredicted RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 DNAJC6O75061 913 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 ZPR1O75312 459 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 XRCC5P13010 732 aaKnown RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 HOXB1P14653 301 aaPredicted RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 ATF4P18848 351 aaPredicted RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 GTF2E1P29083 439 aaPredicted RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 PBX2P40425 430 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 MMP16P51512 607 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 PSMA6P60900 246 aaKnown RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 EVX2Q03828 476 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 DHX9Q08211 1270 aaKnown RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 TAF1CQ15572 869 aaPredicted RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 ERFEQ4G0M1 354 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 LDLRAD1Q5T700 205 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 CC2D2BQ6DHV5 1058 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 MAMSTRQ6ZN01 415 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 STAG2Q8N3U4 1231 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 CPLX3Q8WVH0 158 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 BAP1Q92560 729 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 MKL1Q969V6 931 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 GPRASP2Q96D09 838 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 THAP11Q96EK4 314 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 CSRNP1Q96S65 589 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 CEP89Q96ST8 783 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 SAP130Q9H0E3 1048 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 DNAJC25Q9H1X3 360 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 TSPAN10Q9H1Z9 355 aaPredicted RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 PIF1Q9H611 641 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 SIRPGQ9P1W8 387 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 MAGEC2Q9UBF1 373 aaPredicted RBP2.43□□□□□ -2.02
GABRB3-220ENST00000636512 POLIQ9UNA4 740 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 HPS5Q9UPZ3 1129 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 VPS9D1Q9Y2B5 631 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 TBX22Q9Y458 520 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 PRKAB1Q9Y478 270 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 PCDHGB7Q9Y5F8 929 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 COL4A3BPQ9Y5P4 624 aa2.43□□□□□ -2.02
GABRB3-220ENST00000636512 TMEM229AB2RXF0 380 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 EIF1AYO14602 144 aaKnown RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 GPR182O15218 404 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 TPD52L2O43399 206 aaKnown RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 CPNE3O75131 537 aaKnown RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 INHAP05111 366 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 RACK1P63244 317 aaKnown RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 PTPN12Q05209 780 aaKnown RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 NFX1Q12986 1120 aaKnown RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 PAK2Q13177 524 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 PWP1Q13610 501 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 TCEAL1Q15170 157 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 C11orf91Q3C1V1 193 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 LINC01559Q495D7 138 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 COX20Q5RI15 118 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 DIEXFQ68CQ4 756 aaKnown RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 VASH1Q7L8A9 365 aaPredicted RBP2.42□□□□□ -2.02
GABRB3-220ENST00000636512 CYP2U1Q7Z449 544 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 SH3RF1Q7Z6J0 888 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 MCF2L2Q86YR7 1114 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 RELL1Q8IUW5 271 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 NBPF15Q8N660 670 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 ZNF511Q8NB15 262 aa2.42□□□□□ -2.02
GABRB3-220ENST00000636512 EDEM1Q92611 657 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms