RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 CYP19A1P11511 503 aaPredicted RBP11.09□□□□□ -0.63
CDKL5-209ENST00000635828 NBPF14Q5TI25 921 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 NBPF10Q6P3W6 841 aaKnown RBP11.09□□□□□ -0.63
CDKL5-209ENST00000635828 INTS5Q6P9B9 1019 aaKnown RBP11.09□□□□□ -0.63
CDKL5-209ENST00000635828 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 FMNL2Q96PY5 1086 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 MYL6BP14649 208 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
CDKL5-209ENST00000635828 CRKLP46109 303 aaKnown RBP11.09□□□□□ -0.63
CDKL5-209ENST00000635828 GNAI1P63096 354 aa11.09□□□□□ -0.63
CDKL5-209ENST00000635828 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
CDKL5-209ENST00000635828 R3HDM1Q15032 1099 aaKnown RBP11.07□□□□□ -0.64
CDKL5-209ENST00000635828 PDIA6Q15084 440 aa11.07□□□□□ -0.64
CDKL5-209ENST00000635828 GNPATO15228 680 aa11.07□□□□□ -0.64
CDKL5-209ENST00000635828 CHPF2Q9P2E5 772 aa11.07□□□□□ -0.64
CDKL5-209ENST00000635828 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
CDKL5-209ENST00000635828 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
CDKL5-209ENST00000635828 PHAXQ9H814 394 aaKnown RBP11.06□□□□□ -0.64
CDKL5-209ENST00000635828 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
CDKL5-209ENST00000635828 SNRPA1P09661 255 aaKnown RBP11.06□□□□□ -0.64
CDKL5-209ENST00000635828 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
CDKL5-209ENST00000635828 RGPD3A6NKT7 1758 aaPredicted RBP11.06□□□□□ -0.64
CDKL5-209ENST00000635828 RGPD4Q7Z3J3 1758 aa11.06□□□□□ -0.64
CDKL5-209ENST00000635828 VAMP4O75379 141 aa11.06□□□□□ -0.64
CDKL5-209ENST00000635828 G2E3Q7L622 706 aa11.06□□□□□ -0.64
CDKL5-209ENST00000635828 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
CDKL5-209ENST00000635828 SRP68Q9UHB9 627 aaKnown RBP11.05□□□□□ -0.64
CDKL5-209ENST00000635828 ARXQ96QS3 562 aa11.05□□□□□ -0.64
CDKL5-209ENST00000635828 IL16Q14005 1332 aa11.05□□□□□ -0.64
CDKL5-209ENST00000635828 E9PSI1 815 aa11.05□□□□□ -0.64
CDKL5-209ENST00000635828 LRP10Q7Z4F1 713 aa11.05□□□□□ -0.64
CDKL5-209ENST00000635828 TFCP2L1Q9NZI6 479 aa11.05□□□□□ -0.64
CDKL5-209ENST00000635828 TBC1D2BQ9UPU7 963 aa11.05□□□□□ -0.64
CDKL5-209ENST00000635828 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
CDKL5-209ENST00000635828 LAMB4A4D0S4 1761 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 PNPLA7Q6ZV29 1317 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 SLC27A3Q5K4L6 730 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
CDKL5-209ENST00000635828 TNNQ9UQP3 1299 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
CDKL5-209ENST00000635828 BCAR3O75815 825 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
CDKL5-209ENST00000635828 C4AP0C0L4 1744 aa11.03□□□□□ -0.64
CDKL5-209ENST00000635828 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
CDKL5-209ENST00000635828 CALD1Q05682 793 aaKnown RBP11.03□□□□□ -0.64
CDKL5-209ENST00000635828 MYH16Q9H6N6 1097 aa11.03□□□□□ -0.64
CDKL5-209ENST00000635828 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.64
CDKL5-209ENST00000635828 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.64
CDKL5-209ENST00000635828 AK7Q96M32 723 aa11.02□□□□□ -0.64
CDKL5-209ENST00000635828 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.64
CDKL5-209ENST00000635828 MSH5O43196 834 aa11.02□□□□□ -0.65
CDKL5-209ENST00000635828 ZNF831Q5JPB2 1677 aa11.02□□□□□ -0.65
CDKL5-209ENST00000635828 SSH1Q8WYL5 1049 aa11.02□□□□□ -0.65
CDKL5-209ENST00000635828 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
CDKL5-209ENST00000635828 HLFQ16534 295 aa11.01□□□□□ -0.65
CDKL5-209ENST00000635828 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
CDKL5-209ENST00000635828 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
CDKL5-209ENST00000635828 STARD3NLO95772 234 aa11.01□□□□□ -0.65
CDKL5-209ENST00000635828 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
CDKL5-209ENST00000635828 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
CDKL5-209ENST00000635828 SOS1Q07889 1333 aaPredicted RBP11□□□□□ -0.65
CDKL5-209ENST00000635828 EIF5P55010 431 aaKnown RBP11□□□□□ -0.65
CDKL5-209ENST00000635828 COPS6Q7L5N1 327 aa11□□□□□ -0.65
CDKL5-209ENST00000635828 PLIN1O60240 522 aa11□□□□□ -0.65
CDKL5-209ENST00000635828 USPL1Q5W0Q7 1092 aa11□□□□□ -0.65
CDKL5-209ENST00000635828 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
CDKL5-209ENST00000635828 XAGE3Q8WTP9 111 aa11□□□□□ -0.65
CDKL5-209ENST00000635828 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
CDKL5-209ENST00000635828 CNTNAP4Q9C0A0 1308 aa11□□□□□ -0.65
CDKL5-209ENST00000635828 COL15A1P39059 1388 aa10.99□□□□□ -0.65
CDKL5-209ENST00000635828 F6X3S4 739 aa10.99□□□□□ -0.65
CDKL5-209ENST00000635828 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
CDKL5-209ENST00000635828 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
CDKL5-209ENST00000635828 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
CDKL5-209ENST00000635828 FKBP8Q14318 412 aa10.99□□□□□ -0.65
CDKL5-209ENST00000635828 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
CDKL5-209ENST00000635828 STK32BQ9NY57 414 aa10.99□□□□□ -0.65
CDKL5-209ENST00000635828 RARSP54136 660 aaKnown RBP10.98□□□□□ -0.65
CDKL5-209ENST00000635828 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
CDKL5-209ENST00000635828 JARID2Q92833 1246 aaPredicted RBP10.98□□□□□ -0.65
CDKL5-209ENST00000635828 TRAPPC3LQ5T215 181 aa10.97□□□□□ -0.65
CDKL5-209ENST00000635828 DZIP3Q86Y13 1208 aaKnown RBP10.97□□□□□ -0.65
CDKL5-209ENST00000635828 DDX21Q9NR30 783 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDKL5-209ENST00000635828 RC3H1Q5TC82 1133 aaKnown RBP10.97□□□□□ -0.65
CDKL5-209ENST00000635828 SYNE4Q8N205 404 aa10.97□□□□□ -0.65
CDKL5-209ENST00000635828 CASZ1Q86V15 1759 aa10.97□□□□□ -0.65
CDKL5-209ENST00000635828 CAMTA2O94983 1202 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 GYS1P13807 737 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 MRPL50Q8N5N7 158 aaKnown RBP10.96□□□□□ -0.65
CDKL5-209ENST00000635828 DBF4Q9UBU7 674 aaPredicted RBP10.96□□□□□ -0.65
CDKL5-209ENST00000635828 NUP98P52948 1817 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 ATP5J2-PTCD1G3V325 749 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 GPTP24298 496 aa10.96□□□□□ -0.65
CDKL5-209ENST00000635828 RFC4P35249 363 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms