RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 ABCC5O15440 1437 aa13.57□□□□□ -0.24
COL11A1-211ENST00000635193 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
COL11A1-211ENST00000635193 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-211ENST00000635193 TTC22Q5TAA0 569 aa13.57□□□□□ -0.24
COL11A1-211ENST00000635193 GNL3LQ9NVN8 582 aaKnown RBP13.57□□□□□ -0.24
COL11A1-211ENST00000635193 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-211ENST00000635193 CEP126Q9P2H0 1117 aa13.57□□□□□ -0.24
COL11A1-211ENST00000635193 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
COL11A1-211ENST00000635193 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-211ENST00000635193 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
COL11A1-211ENST00000635193 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-211ENST00000635193 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 UBAC1Q9BSL1 405 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 EZRP15311 586 aaKnown RBP13.56□□□□□ -0.24
COL11A1-211ENST00000635193 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 NUCB1Q02818 461 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 ATF3P18847 181 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 STX1AQ16623 288 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 CTR9Q6PD62 1173 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 CCDC171Q6TFL3 1326 aa13.56□□□□□ -0.24
COL11A1-211ENST00000635193 GOLGA6L10A0A0M3HER8 536 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 F6X3S4 739 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 NF2P35240 595 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 ZNF165P49910 485 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
COL11A1-211ENST00000635193 TDO2P48775 406 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 CABP4P57796 275 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 TFIP11Q9UBB9 837 aaKnown RBP13.55□□□□□ -0.24
COL11A1-211ENST00000635193 PCDHB15Q9Y5E8 787 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 HS1BP3Q53T59 392 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 TMC6Q7Z403 805 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 FSIP1Q8NA03 581 aa13.55□□□□□ -0.24
COL11A1-211ENST00000635193 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-211ENST00000635193 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
COL11A1-211ENST00000635193 GUCY1B3Q02153 619 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 ZNF397Q8NF99 534 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-211ENST00000635193 RAI14Q9P0K7 980 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 SNX21Q969T3 373 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 TMX3Q96JJ7 454 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 GOLGA6L9A6NEM1 432 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 PTPRCP08575 1304 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 KLHL10Q6JEL2 608 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
COL11A1-211ENST00000635193 GIMAP6Q6P9H5 292 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 CAVIN2O95810 425 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 RSPH14Q9UHP6 348 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 MAPKBP1O60336 1514 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 SPA17Q15506 151 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 LUZP1Q86V48 1076 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
COL11A1-211ENST00000635193 GBP2P32456 591 aaPredicted RBP13.52□□□□□ -0.24
COL11A1-211ENST00000635193 CCDC175P0C221 793 aa13.52□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
COL11A1-211ENST00000635193 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
COL11A1-211ENST00000635193 IGSF3O75054 1194 aa13.52□□□□□ -0.25
COL11A1-211ENST00000635193 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
COL11A1-211ENST00000635193 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
COL11A1-211ENST00000635193 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 KIF20AO95235 890 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 AIDAQ96BJ3 306 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 RRAGDQ9NQL2 400 aaPredicted RBP13.51□□□□□ -0.25
COL11A1-211ENST00000635193 IFFO1Q0D2I5 559 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC150Q8NCX0 1101 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
COL11A1-211ENST00000635193 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 FEZ1Q99689 392 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC8Q9H0W5 538 aaPredicted RBP13.51□□□□□ -0.25
COL11A1-211ENST00000635193 OGFRQ9NZT2 677 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 SMC1AQ14683 1233 aaKnown RBP13.51□□□□□ -0.25
COL11A1-211ENST00000635193 TTC31Q49AM3 519 aaPredicted RBP13.51□□□□□ -0.25
COL11A1-211ENST00000635193 CNNM3Q8NE01 707 aa13.51□□□□□ -0.25
COL11A1-211ENST00000635193 BIN1O00499 593 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 SSBP05455 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL11A1-211ENST00000635193 PAFAH1B1P43034 410 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 IL16Q14005 1332 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
COL11A1-211ENST00000635193 CPLX3Q8WVH0 158 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 EVI5LQ96CN4 794 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 SEPT11Q9NVA2 429 aaKnown RBP13.5□□□□□ -0.25
COL11A1-211ENST00000635193 SCAF11Q99590 1463 aaKnown RBP13.5□□□□□ -0.25
COL11A1-211ENST00000635193 SDSP20132 328 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
COL11A1-211ENST00000635193 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
COL11A1-211ENST00000635193 RASSF4Q9H2L5 321 aa13.49□□□□□ -0.25
COL11A1-211ENST00000635193 GNG11P61952 73 aa13.49□□□□□ -0.25
COL11A1-211ENST00000635193 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
COL11A1-211ENST00000635193 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
COL11A1-211ENST00000635193 NUP88Q99567 741 aaPredicted RBP13.49□□□□□ -0.25
COL11A1-211ENST00000635193 BCCIPQ9P287 314 aaKnown RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms