RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 GOLGA6L7A0A1B0GV03 622 aa24.51■■□□□ 1.51
SMARCA2-227ENST00000634760 MCM3P25205 808 aa24.51■■□□□ 1.51
SMARCA2-227ENST00000634760 SYCE3A1L190 88 aa24.51■■□□□ 1.51
SMARCA2-227ENST00000634760 SEPT7Q16181 437 aaKnown RBP24.51■■□□□ 1.51
SMARCA2-227ENST00000634760 RAB34Q9BZG1 259 aa24.51■■□□□ 1.51
SMARCA2-227ENST00000634760 LRRFIP2Q9Y608 721 aaKnown RBP24.51■■□□□ 1.51
SMARCA2-227ENST00000634760 POTEJP0CG39 1038 aa24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 ZSCAN29Q8IWY8 852 aaPredicted RBP24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 KRI1Q8N9T8 703 aaKnown RBP24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 THUMPD2Q9BTF0 503 aaKnown RBP24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 DDX19AQ9NUU7 478 aaKnown RBP24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 ZPR1O75312 459 aa24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 SSRP1Q08945 709 aaKnown RBP24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 DDX11Q96FC9 970 aa24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 FKBP15Q5T1M5 1219 aa24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 CTCFLQ8NI51 663 aaPredicted RBP24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 AMOTL2Q9Y2J4 779 aa24.5■■□□□ 1.51
SMARCA2-227ENST00000634760 KIF20AO95235 890 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 TRIM27P14373 513 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 EMILIN1Q9Y6C2 1016 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 C11orf95C9JLR9 678 aaPredicted RBP24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 ZNF213O14771 459 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 FLIIQ13045 1269 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 CFAP100Q494V2 611 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 BOLA2Q9H3K6 86 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 ARHGAP29Q52LW3 1261 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 TSPYL1Q9H0U9 437 aa24.49■■□□□ 1.51
SMARCA2-227ENST00000634760 TRIM21P19474 475 aaKnown RBP24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 DISP3Q9P2K9 1392 aa24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 SLC12A7Q9Y666 1083 aa24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 TTC21AQ8NDW8 1320 aa24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 POLR3DP05423 398 aaPredicted RBP24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 SSBP05455 408 aaKnown RBP eCLIP24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 IQCA1Q86XH1 822 aa24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 EHMT1Q9H9B1 1298 aa24.48■■□□□ 1.51
SMARCA2-227ENST00000634760 MPHOSPH10O00566 681 aaKnown RBP24.47■■□□□ 1.51
SMARCA2-227ENST00000634760 SFPQP23246 707 aaKnown RBP eCLIP24.47■■□□□ 1.51
SMARCA2-227ENST00000634760 ECHDC1Q9NTX5 307 aa24.47■■□□□ 1.51
SMARCA2-227ENST00000634760 BCL11BQ9C0K0 894 aaPredicted RBP24.47■■□□□ 1.51
SMARCA2-227ENST00000634760 SPA17Q15506 151 aa24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 TMEM266Q2M3C6 531 aa24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 GPATCH8Q9UKJ3 1502 aaKnown RBP24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 XPCQ01831 940 aaPredicted RBP24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 MKNK2Q9HBH9 465 aa24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 ABCF2Q9UG63 623 aa24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 HDAC1Q13547 482 aaPredicted RBP24.46■■□□□ 1.51
SMARCA2-227ENST00000634760 A0A087WZG4 1122 aa24.45■■□□□ 1.5
SMARCA2-227ENST00000634760 NEFHP12036 1026 aa24.45■■□□□ 1.5
SMARCA2-227ENST00000634760 C20orf194Q5TEA3 1177 aa24.45■■□□□ 1.5
SMARCA2-227ENST00000634760 CAVIN2O95810 425 aa24.45■■□□□ 1.5
SMARCA2-227ENST00000634760 DZIP1Q86YF9 867 aaKnown RBP24.45■■□□□ 1.5
SMARCA2-227ENST00000634760 TTC22Q5TAA0 569 aa24.44■■□□□ 1.5
SMARCA2-227ENST00000634760 CETN2P41208 172 aa24.44■■□□□ 1.5
SMARCA2-227ENST00000634760 FILIP1Q7Z7B0 1213 aa24.44■■□□□ 1.5
SMARCA2-227ENST00000634760 CCDC12Q8WUD4 166 aaPredicted RBP24.44■■□□□ 1.5
SMARCA2-227ENST00000634760 IFNL2Q8IZJ0 200 aa24.44■■□□□ 1.5
SMARCA2-227ENST00000634760 GSDMDP57764 484 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 SKIDA1Q1XH10 827 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 UVSSAQ2YD98 709 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 SEPT11Q9NVA2 429 aaKnown RBP24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 BICDL1Q6ZP65 573 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 GOLGA8AA7E2F4 631 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 GOLGA8BA8MQT2 603 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 GBP2P32456 591 aaPredicted RBP24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 IDI1Q13907 227 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 MAP9Q49MG5 647 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 UBXN4Q92575 508 aa24.43■■□□□ 1.5
SMARCA2-227ENST00000634760 PTPN14Q15678 1187 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 KIF5CO60282 957 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 MCM5P33992 734 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 CAMK4Q16566 473 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 CATIPQ7Z7H3 387 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 CWC25Q9NXE8 425 aaPredicted RBP24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 TRMT112Q9UI30 125 aaKnown RBP24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 VPS36Q86VN1 386 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 SPINK5Q9NQ38 1064 aaPredicted RBP24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 CASQ1P31415 396 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 ZNF444Q8N0Y2 327 aaPredicted RBP24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 MBIPQ9NS73 344 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 CTTNBP2Q8WZ74 1663 aa24.42■■□□□ 1.5
SMARCA2-227ENST00000634760 PUS7Q96PZ0 661 aaKnown RBP24.41■■□□□ 1.5
SMARCA2-227ENST00000634760 RBM10P98175 930 aaKnown RBP24.41■■□□□ 1.5
SMARCA2-227ENST00000634760 CUL5Q93034 780 aa24.41■■□□□ 1.5
SMARCA2-227ENST00000634760 MAP3K2Q9Y2U5 619 aa24.41■■□□□ 1.5
SMARCA2-227ENST00000634760 KANK3Q6NY19 840 aa24.41■■□□□ 1.5
SMARCA2-227ENST00000634760 TBC1D2Q9BYX2 928 aa24.41■■□□□ 1.5
SMARCA2-227ENST00000634760 STX1AQ16623 288 aa24.41■■□□□ 1.5
SMARCA2-227ENST00000634760 MINDY4BA8MYZ0 360 aa24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 TOP1P11387 765 aaKnown RBP24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 CRACR2BQ8N4Y2 399 aaPredicted RBP24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 MPRIPQ6WCQ1 1025 aa24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 FAM177A1Q8N128 213 aaPredicted RBP24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 CCDC8Q9H0W5 538 aaPredicted RBP24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 TBC1D9Q6ZT07 1266 aa24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 TNPO1Q92973 898 aaKnown RBP24.4■■□□□ 1.5
SMARCA2-227ENST00000634760 RRP9O43818 475 aaKnown RBP24.39■■□□□ 1.5
SMARCA2-227ENST00000634760 F6X3S4 739 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms