RNA–Protein interactions for RNA: ENST00000633151.1

LINC01002-222, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-222	ENST00000633151	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.7	□□□□□ -1.34
LINC01002-222	ENST00000633151	MPHOSPH9	Q99550	1183 aa		6.7	□□□□□ -1.34
LINC01002-222	ENST00000633151	TCOF1	Q13428	1488 aa	Known RBP	6.7	□□□□□ -1.34
LINC01002-222	ENST00000633151	PLEKHH2	Q8IVE3	1493 aa		6.7	□□□□□ -1.34
LINC01002-222	ENST00000633151	PTPRK	Q15262	1439 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	SENP3-EIF4A1	A0A087X0R7	540 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	SLC35F4	A4IF30	521 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	TRAK2	O60296	914 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	FRAT2	O75474	233 aa	Predicted RBP	6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	MRE11	P49959	708 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	INSM1	Q01101	510 aa	Predicted RBP	6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	VAC14	Q08AM6	782 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	MTERF4	Q7Z6M4	381 aa	Known RBP	6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	CCDC155	Q8N6L0	562 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	OSBPL3	Q9H4L5	887 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	RRAGD	Q9NQL2	400 aa	Predicted RBP	6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	PODXL2	Q9NZ53	605 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	CEP126	Q9P2H0	1117 aa		6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.69	□□□□□ -1.34
LINC01002-222	ENST00000633151	HECW1	Q76N89	1606 aa		6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	NCL	P19338	710 aa	Known RBP	6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	PTMS	P20962	102 aa		6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	ABL2	P42684	1182 aa		6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	NGEF	Q8N5V2	710 aa		6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	CDCA7	Q9BWT1	371 aa	Predicted RBP	6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	PRM3	Q9NNZ6	103 aa		6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	THOC2	Q8NI27	1593 aa	Known RBP	6.68	□□□□□ -1.34
LINC01002-222	ENST00000633151	CFTR	P13569	1480 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151		A0A1W2PRU2	124 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	GOLGA6L3	A6NEY3	463 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	RNF144A	P50876	292 aa	Predicted RBP	6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	C8orf34	Q49A92	452 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	CYP2U1	Q7Z449	544 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	NLRP13	Q86W25	1043 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	COG6	Q9Y2V7	657 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	SCAPER	Q9BY12	1400 aa		6.67	□□□□□ -1.34
LINC01002-222	ENST00000633151	DENND4B	O75064	1496 aa	Predicted RBP	6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	ARHGEF11	O15085	1522 aa		6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	MEN1	O00255	615 aa		6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	PHTF2	Q8N3S3	785 aa		6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	ANTXR1	Q9H6X2	564 aa		6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	ARHGEF10L	Q9HCE6	1279 aa		6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	STK17A	Q9UEE5	414 aa		6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	EIF3A	Q14152	1382 aa	Known RBP	6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	UHRF1BP1	Q6BDS2	1440 aa		6.66	□□□□□ -1.34
LINC01002-222	ENST00000633151	XRCC6	P12956	609 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	ITGA6	P23229	1130 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	GPC1	P35052	558 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	KRT76	Q01546	638 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	CLN3	Q13286	438 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	NBPF8	Q3BBV2	869 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	TSGA10IP	Q3SY00	556 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	HS1BP3	Q53T59	392 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	LYSMD3	Q7Z3D4	306 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	GPR161	Q8N6U8	529 aa	Known RBP	6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	NANOS1	Q8WY41	292 aa	Known RBP	6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	POM121	Q96HA1	1249 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	NAP1L5	Q96NT1	182 aa	Predicted RBP	6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	CHIC2	Q9UKJ5	165 aa		6.65	□□□□□ -1.34
LINC01002-222	ENST00000633151	MTUS2	Q5JR59	1369 aa		6.65	□□□□□ -1.35
LINC01002-222	ENST00000633151	TEX14	Q8IWB6	1497 aa		6.65	□□□□□ -1.35
LINC01002-222	ENST00000633151	ZSCAN1	Q8NBB4	408 aa		6.64	□□□□□ -1.35
LINC01002-222	ENST00000633151	RAB6B	Q9NRW1	208 aa		6.64	□□□□□ -1.35
LINC01002-222	ENST00000633151	MAPK8IP3	Q9UPT6	1336 aa		6.64	□□□□□ -1.35
LINC01002-222	ENST00000633151	GAPVD1	Q14C86	1478 aa		6.64	□□□□□ -1.35
LINC01002-222	ENST00000633151	PCF11	O94913	1555 aa	Known RBP	6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	IL2RA	P01589	272 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	RHOQ	P17081	205 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	HMGXB3	Q12766	1538 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	WASHC4	Q2M389	1173 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	PRICKLE2	Q7Z3G6	844 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	RNF135	Q8IUD6	432 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	GCC2	Q8IWJ2	1684 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	MYH16	Q9H6N6	1097 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	DOLK	Q9UPQ8	538 aa		6.63	□□□□□ -1.35
LINC01002-222	ENST00000633151	BICRA	Q9NZM4	1560 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	MBD5	Q9P267	1494 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	BLM	P54132	1417 aa	Predicted RBP	6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	PARD3	Q8TEW0	1356 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	NINL	Q9Y2I6	1382 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	MCM4	P33991	863 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	SLFNL1	Q499Z3	407 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	UTP14C	Q5TAP6	766 aa	Known RBP	6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	SMAP1	Q8IYB5	467 aa	Predicted RBP	6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	GRIP2	Q9C0E4	1043 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	PRDM4	Q9UKN5	801 aa		6.62	□□□□□ -1.35
LINC01002-222	ENST00000633151	EHBP1L1	Q8N3D4	1523 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	UGGT2	Q9NYU1	1516 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	SNAPC4	Q5SXM2	1469 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	USP47	Q96K76	1375 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	OFD1	O75665	1012 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	MYC	P01106	439 aa	Predicted RBP	6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	GNRH1	P01148	92 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	TMEM132A	Q24JP5	1023 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	RNFT1	Q5M7Z0	435 aa		6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	TRMT2A	Q8IZ69	625 aa	Known RBP	6.61	□□□□□ -1.35
LINC01002-222	ENST00000633151	NLRP3	Q96P20	1036 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms