RNA–Protein interactions for RNA: ENST00000633151.1

LINC01002-222, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-222ENST00000633151 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
LINC01002-222ENST00000633151 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
LINC01002-222ENST00000633151 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
LINC01002-222ENST00000633151 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
LINC01002-222ENST00000633151 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
LINC01002-222ENST00000633151 FOXD1Q16676 465 aa15.35■□□□□ 0.05
LINC01002-222ENST00000633151 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
LINC01002-222ENST00000633151 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
LINC01002-222ENST00000633151 ADRA2BP18089 450 aa14.52□□□□□ -0.09
LINC01002-222ENST00000633151 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
LINC01002-222ENST00000633151 MSH5O43196 834 aa14.22□□□□□ -0.13
LINC01002-222ENST00000633151 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
LINC01002-222ENST00000633151 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
LINC01002-222ENST00000633151 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
LINC01002-222ENST00000633151 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
LINC01002-222ENST00000633151 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
LINC01002-222ENST00000633151 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
LINC01002-222ENST00000633151 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
LINC01002-222ENST00000633151 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
LINC01002-222ENST00000633151 KCNA4P22459 653 aa12.62□□□□□ -0.39
LINC01002-222ENST00000633151 NPM3O75607 178 aaKnown RBP12.61□□□□□ -0.39
LINC01002-222ENST00000633151 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
LINC01002-222ENST00000633151 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
LINC01002-222ENST00000633151 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
LINC01002-222ENST00000633151 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
LINC01002-222ENST00000633151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01002-222ENST00000633151 POTEHQ6S545 545 aa12.08□□□□□ -0.48
LINC01002-222ENST00000633151 SLC4A2P04920 1241 aa12□□□□□ -0.49
LINC01002-222ENST00000633151 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
LINC01002-222ENST00000633151 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
LINC01002-222ENST00000633151 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
LINC01002-222ENST00000633151 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
LINC01002-222ENST00000633151 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
LINC01002-222ENST00000633151 ZBTB22O15209 634 aa11.65□□□□□ -0.54
LINC01002-222ENST00000633151 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
LINC01002-222ENST00000633151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
LINC01002-222ENST00000633151 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
LINC01002-222ENST00000633151 CAPN15O75808 1086 aa11.59□□□□□ -0.55
LINC01002-222ENST00000633151 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
LINC01002-222ENST00000633151 APLP2Q06481 763 aa11.53□□□□□ -0.56
LINC01002-222ENST00000633151 DSG3P32926 999 aa11.5□□□□□ -0.57
LINC01002-222ENST00000633151 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
LINC01002-222ENST00000633151 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
LINC01002-222ENST00000633151 ATF5Q9Y2D1 282 aaPredicted RBP11.39□□□□□ -0.59
LINC01002-222ENST00000633151 ABCB7O75027 752 aa11.38□□□□□ -0.59
LINC01002-222ENST00000633151 CSRNP3Q8WYN3 585 aa11.31□□□□□ -0.6
LINC01002-222ENST00000633151 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
LINC01002-222ENST00000633151 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
LINC01002-222ENST00000633151 POLA2Q14181 598 aa11.23□□□□□ -0.61
LINC01002-222ENST00000633151 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
LINC01002-222ENST00000633151 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
LINC01002-222ENST00000633151 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
LINC01002-222ENST00000633151 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
LINC01002-222ENST00000633151 FBLN2P98095 1184 aa10.84□□□□□ -0.67
LINC01002-222ENST00000633151 AKT1S1Q96B36 256 aa10.75□□□□□ -0.69
LINC01002-222ENST00000633151 SPDYE2BA6NHP3 402 aa10.72□□□□□ -0.69
LINC01002-222ENST00000633151 SPDYE6P0CI01 402 aa10.72□□□□□ -0.69
LINC01002-222ENST00000633151 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
LINC01002-222ENST00000633151 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
LINC01002-222ENST00000633151 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
LINC01002-222ENST00000633151 SSUH2Q9Y2M2 353 aa10.64□□□□□ -0.71
LINC01002-222ENST00000633151 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
LINC01002-222ENST00000633151 CHRDL2Q6WN34 429 aa10.61□□□□□ -0.71
LINC01002-222ENST00000633151 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
LINC01002-222ENST00000633151 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
LINC01002-222ENST00000633151 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC01002-222ENST00000633151 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
LINC01002-222ENST00000633151 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
LINC01002-222ENST00000633151 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
LINC01002-222ENST00000633151 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC01002-222ENST00000633151 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
LINC01002-222ENST00000633151 PROM2Q8N271 834 aa10.31□□□□□ -0.76
LINC01002-222ENST00000633151 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
LINC01002-222ENST00000633151 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
LINC01002-222ENST00000633151 FKBP8Q14318 412 aa10.22□□□□□ -0.77
LINC01002-222ENST00000633151 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
LINC01002-222ENST00000633151 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
LINC01002-222ENST00000633151 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
LINC01002-222ENST00000633151 HAX1O00165 279 aa10.11□□□□□ -0.79
LINC01002-222ENST00000633151 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
LINC01002-222ENST00000633151 EVX2Q03828 476 aa10.07□□□□□ -0.8
LINC01002-222ENST00000633151 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
LINC01002-222ENST00000633151 MNX1P50219 401 aaPredicted RBP10.02□□□□□ -0.81
LINC01002-222ENST00000633151 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
LINC01002-222ENST00000633151 LHX8Q68G74 356 aa9.96□□□□□ -0.82
LINC01002-222ENST00000633151 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC01002-222ENST00000633151 MIER1Q8N108 512 aa9.89□□□□□ -0.83
LINC01002-222ENST00000633151 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
LINC01002-222ENST00000633151 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
LINC01002-222ENST00000633151 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
LINC01002-222ENST00000633151 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
LINC01002-222ENST00000633151 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
LINC01002-222ENST00000633151 GABBR2O75899 941 aa9.83□□□□□ -0.84
LINC01002-222ENST00000633151 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
LINC01002-222ENST00000633151 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
LINC01002-222ENST00000633151 RASEFQ8IZ41 740 aa9.78□□□□□ -0.84
LINC01002-222ENST00000633151 PHF12Q96QT6 1004 aa9.77□□□□□ -0.85
LINC01002-222ENST00000633151 ZBTB47Q9UFB7 747 aaPredicted RBP9.76□□□□□ -0.85
LINC01002-222ENST00000633151 NUBP1P53384 320 aa9.75□□□□□ -0.85
LINC01002-222ENST00000633151 TSPYL2Q9H2G4 693 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms